Transcript Information: S_Transcript_54259.p1


Annotated TAIR IDAT5G62610.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25133117-25134600 | Reverse length=281
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5748807629347
Replicate 23.0734234209473
Replicate 31.5598334001055
Condition 2: 8 Hour
Replicate 15.4109199312128
Replicate 29.126823823172
Replicate 34.0298617362651
Condition 3: 24 Hour
Replicate 12.8257063221664
Replicate 22.8188820368591
Replicate 35.2702779353974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54259.p1 GENE.S_Transcript_54259~~S_Transcript_54259.p1 ORF type:complete len:201 (+),score=69.01 S_Transcript_54259:564-1166(+)
ATGGATCCTCCATTGATAAGTGAAGGTTCATTCTCAACTTCAAACCCTTCATTGGCTGAGATTTGGCCTTTTCATAGTGGGGCTGGAGATTTAGGCTTGAGAATGGCTAGTAGTGGTGGTGGCGGTGGGTTTGGGAATGGTTTGATTGAGAGCTTAATGAATCATAATAATGGTGTTCATGTTAATGGTGGTGGTGTTGGGGCAGTGAATAGAGATGGGTCAATTGAGGAGTCAACAGTGACTGAGCAAAGTGGAAGTCTTGGTCTTGGTGGTGGTGGTAATAATAATGGTGGGAAGAAGAGAAGAGAAACAAATGTTTCAGAAGATGAGTCTTCTAAGCTAGTTTCCACTACTAGTAGTGGCAATGAATTGAAGGAGTCAAATAGTAAACGCATGAAAAAATCAGATTCCAAGGATGATAATGGCAGTTCAAAAGCTGGAGGTGAAGCTAGTTCAGCTGGTGGTAGCAAGCCAGCTGACAAAACAGCTGAGCCACCAAAAGACTACATCCATGTCAGAGCAAGAAGGGGTCAAGCTACGGATAGCCACAGCCTGGCCGAGAGAGTAATTTTCCTCTACTTTTGTGTATATTGTCCACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54259.p1 GENE.S_Transcript_54259~~S_Transcript_54259.p1 ORF type:complete len:201 (+),score=69.01 S_Transcript_54259:564-1166(+)
MDPPLISEGSFSTSNPSLAEIWPFHSGAGDLGLRMASSGGGGGFGNGLIESLMNHNNGVHVNGGGVGAVNRDGSIEESTVTEQSGSLGLGGGGNNNGGKKRRETNVSEDESSKLVSTTSSGNELKESNSKRMKKSDSKDDNGSSKAGGEASSAGGSKPADKTAEPPKDYIHVRARRGQATDSHSLAERVIFLYFCVYCPL*

Click here to download the sequence:
Link to NCBI Protein BLAST