Transcript Information: S_Transcript_54261.p1


Annotated TAIR IDAT5G62610.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25133117-25134600 | Reverse length=281
E-Value9.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.222685906014
Replicate 215.769469257502
Replicate 318.261332122123
Condition 2: 8 Hour
Replicate 122.514018629891
Replicate 222.371848639727
Replicate 321.665287729653
Condition 3: 24 Hour
Replicate 116.974548810724
Replicate 216.05043705079
Replicate 315.960178918647


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54261.p1 GENE.S_Transcript_54261~~S_Transcript_54261.p1 ORF type:complete len:305 (+),score=93.37,HLH|PF00010.22|4.6e-08 S_Transcript_54261:564-1478(+)
ATGGATCCTCCATTGATAAGTGAAGGTTCATTCTCAACTTCAAACCCTTCATTGGCTGAGATTTGGCCTTTTCATAGTGGGGCTGGAGATTTAGGCTTGAGAATGGCTAGTAGTGGTGGTGGCGGTGGGTTTGGGAATGGTTTGATTGAGAGCTTAATGAATCATAATAATGGTGTTCATGTTAATGGTGGTGGTGTTGGGGCAGTGAATAGAGATGGGTCAATTGAGGAGTCAACAGTGACTGAGCAAAGTGGAAGTCTTGGTCTTGGTGGTGGTGGTAATAATAATGGTGGGAAGAAGAGAAGAGAAACAAATGTTTCAGAAGATGAGTCTTCTAAGCTAGTTTCCACTACTAGTAGTGGCAATGAATTGAAGGAGTCAAATAGTAAACGCATGAAAAAATCAGATTCCAAGGATGATAATGGCAGTTCAAAAGCTGGAGGTGAAGCTAGTTCAGCTGGTGGTAGCAAGCCAGCTGACAAAACAGCTGAGCCACCAAAAGACTACATCCATGTCAGAGCAAGAAGGGGTCAAGCTACGGATAGCCACAGCCTGGCCGAGAGAGCTAGGAGAGAAAAGATAAGTGAAAGAATGAAGATATTACAAGATTTGGTTCCTGGATGTAACAAGGTTATTGGAAAAGCACTAGTGCTTGATGAGATTATCAACTACATACAATCCCTACAGCGGCAGGTCGAATTCTTGTCCATGAAGCTAGAAGCAGTCAATTCTGGGATGATTCCCTCAATTAATGGATGTCATTCAAAAGATGTGAATCAGCTAGGGGTGCCCTCTTTTGATCCAAGTGGAATGATTTTTGGTGCACAAGCCGCAAGGGAATTTGCAGCAGCAGCAGGACCACAAGCAGAGTGGTTGCATATGCAATTAGGTGGAAGTTTCGAACGAACATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54261.p1 GENE.S_Transcript_54261~~S_Transcript_54261.p1 ORF type:complete len:305 (+),score=93.37,HLH|PF00010.22|4.6e-08 S_Transcript_54261:564-1478(+)
MDPPLISEGSFSTSNPSLAEIWPFHSGAGDLGLRMASSGGGGGFGNGLIESLMNHNNGVHVNGGGVGAVNRDGSIEESTVTEQSGSLGLGGGGNNNGGKKRRETNVSEDESSKLVSTTSSGNELKESNSKRMKKSDSKDDNGSSKAGGEASSAGGSKPADKTAEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSGMIPSINGCHSKDVNQLGVPSFDPSGMIFGAQAAREFAAAAGPQAEWLHMQLGGSFERTS*

Click here to download the sequence:
Link to NCBI Protein BLAST