Transcript Information: S_Transcript_54285.p1


Annotated TAIR IDAT2G38710.1
Annotated Gene NameAMMECR1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16184517-16186764 | Reverse length=214
E-Value1.5E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.152857143026
Replicate 230.516755649647
Replicate 325.940483930672
Condition 2: 8 Hour
Replicate 121.325390317133
Replicate 219.026525478646
Replicate 325.399724949861
Condition 3: 24 Hour
Replicate 127.765459389914
Replicate 232.830755087232
Replicate 333.354385825457


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54285.p1 GENE.S_Transcript_54285~~S_Transcript_54285.p1 ORF type:5prime_partial len:214 (+),score=34.44,AMMECR1|PF01871.13|8.4e-50 S_Transcript_54285:1-642(+)
AAGAAAATGGTGTCGGCAAAAAGGGAGATGGCTGTGTACTGCTTTGACACACTTGTAGCTCACTACAATGGCGACCAACCTCCTCCTCCTGCTTTTGAGGAGGGTCACCACCCACTATTTGTTACCTGGAAGAAAGTGGTGTATGGAGGTGACCCTCGTCTTCGTGGCTGCATTGGGACTCTTGAACCCCGTGACATTATCAATGGTTTTAAAGACTATGCTCTTACAAGTGCACTGAGAGATCGTCGTTTCCCCCCGATTCAGGCTAAAGAGTTACCTCATTTGGAATGTACCGTTTCTATTCTAACTGAATATGAGACTGCCATGAACCACCTTGACTGGGAGGTAGGAAAGCATGGTATAATAATTGAATTCACTGATCCAGACTACAATACCAGGCGAAGTGCCACATACTTACCTGACGTTGCTGCTCAAGAAGGTTGGACAAAGATCGAGGCCATTGATTCTTTAATGCGTAAGGCAGGTTACAATGGCGTCACAACAGATTCAATTCGGAAGCGCATTCGGTTAACTCGTTACCAGAGCACAGCATTTACAATGCACTACAGTGAGTACATTGCTCATGTGAAGGATACCAGAGGCACGGTTCCTGCTATTAACGGGTTGAAGCCTGGCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54285.p1 GENE.S_Transcript_54285~~S_Transcript_54285.p1 ORF type:5prime_partial len:214 (+),score=34.44,AMMECR1|PF01871.13|8.4e-50 S_Transcript_54285:1-642(+)
KKMVSAKREMAVYCFDTLVAHYNGDQPPPPAFEEGHHPLFVTWKKVVYGGDPRLRGCIGTLEPRDIINGFKDYALTSALRDRRFPPIQAKELPHLECTVSILTEYETAMNHLDWEVGKHGIIIEFTDPDYNTRRSATYLPDVAAQEGWTKIEAIDSLMRKAGYNGVTTDSIRKRIRLTRYQSTAFTMHYSEYIAHVKDTRGTVPAINGLKPGN*

Click here to download the sequence:
Link to NCBI Protein BLAST