Transcript Information: S_Transcript_54288.p1


Annotated TAIR IDAT2G38710.1
Annotated Gene NameAMMECR1 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16184517-16186764 | Reverse length=214
E-Value3.4E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0285217868669
Replicate 21.3855858176217
Replicate 31.3364301509856
Condition 2: 8 Hour
Replicate 11.0302120926151
Replicate 21.9453781425849
Replicate 32.4714026208674
Condition 3: 24 Hour
Replicate 11.1608392193069
Replicate 20.32846103733837
Replicate 30.97476500116391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54288.p1 GENE.S_Transcript_54288~~S_Transcript_54288.p1 ORF type:5prime_partial len:207 (+),score=30.64,AMMECR1|PF01871.13|8.1e-38 S_Transcript_54288:1-621(+)
AAGAAAATGGTGTCGGCAAAAAGGGAGATGGCTGTGTACTGCTTTGACACACTTGTAGCTCACTACAATGGCGACCAACCTCCTCCTCCTGCTTTTGAGGAGGGTCACCACCCACTATTTGTTACCTGGAAGAAAGTGGTGTATGGAGGTGACCCTCGTCTTCGTGGCTGCATTGGGACTCTTGAACCCCGTGACATTATCAATGGTTTTAAAGACTATGCTCTTACAAGTGCACTGAGAGATCGTCGTTTCCCCCCGATTCAGGCTAAAGAGTTACCTCATTTGGAATGTACCGTTTCTATTCTAACTGAATATGAGACTGCCATGAACCACCTTGACTGGGAGGTAGGAAAGCATGGTATAATAATTGAATTCACTGATCCAGACTACAATACCAGGCGAAGTGCCACATACTTACCTGACGTTGCTGCTCAAGAAGGTGAGTGGCATTGCTTATTGTTTACCATAAGAACTTCTTGTGAGCCTTTTATCCCCATATCCTCTTTGTTACCCCATAAGCGGCCATTCACCATGGTTTTCAGACTTAGAATTGTTATGGAGAACAATAAAAATACTCTTGTTGAGAAAGGTTTGTTAGATCAAAACCTTTATTTTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54288.p1 GENE.S_Transcript_54288~~S_Transcript_54288.p1 ORF type:5prime_partial len:207 (+),score=30.64,AMMECR1|PF01871.13|8.1e-38 S_Transcript_54288:1-621(+)
KKMVSAKREMAVYCFDTLVAHYNGDQPPPPAFEEGHHPLFVTWKKVVYGGDPRLRGCIGTLEPRDIINGFKDYALTSALRDRRFPPIQAKELPHLECTVSILTEYETAMNHLDWEVGKHGIIIEFTDPDYNTRRSATYLPDVAAQEGEWHCLLFTIRTSCEPFIPISSLLPHKRPFTMVFRLRIVMENNKNTLVEKGLLDQNLYFL*

Click here to download the sequence:
Link to NCBI Protein BLAST