Transcript Information: S_Transcript_54298.p1


Annotated TAIR IDAT5G13160.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)PBS1
Annotation TypeOrtholog
Chromosome Positionchr5:4176854-4179682 | Forward length=456
E-Value5.5E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.978488693412
Replicate 216.303426821617
Replicate 313.813535259404
Condition 2: 8 Hour
Replicate 118.413489631259
Replicate 217.744739382916
Replicate 318.662067381068
Condition 3: 24 Hour
Replicate 119.08137413335
Replicate 215.154717379365
Replicate 315.09270930266


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54298.p1 GENE.S_Transcript_54298~~S_Transcript_54298.p1 ORF type:complete len:498 (+),score=106.65,Pkinase|PF00069.21|1.3e-44,Pkinase_Tyr|PF07714.13|1.8e-43 S_Transcript_54298:695-2188(+)
ATGGGGTGTTTTTCATGTTTTGAATCAAAAGAAGAGGAAAGATTGAATCCTCCTTCAAAGGTTAAAGATGATCATCGCAAAGATGGATTGCCTTCTACTAACTCCAACATCTCTAAATTATCTTCTGGAGCTGACAGGCTGAAATCGAGAAATGCCGTGGGTCCAAGGCGAGAACCGTCCGTTCCTAAGGAGGGAGTACCTGACAACAATATATCTGCCCAGACATTCACTTTCCGCGAGCTTGCAGCATCAACGAAGAACTTCAGGGATGAATGCTTTCTGGGAGAAGGAGGATTCGGTCGTGTATACAAGGGACAACTAGAGACTGGTCAGGTTGTTGCTGTTAAAATGTTGGACAGAAATGGTCTCCAGGGAAACAGAGAGTTCCTAGTAGAGGTTCTTATGCTCAGCCTTCTACATCACCCCAATCTAGTGAATCTGATAGGATATTGTGCTGATGGTGATCAGCGGCTACTTGTATATGAATACATGTCAATGGGATCACTGGAGGATCATCTTCTCGATCTCCCACCTGATAGAGATCCACTAGACTGGAACACAAGGATGAAGATTGCTGCAGGAGCAGCGAAAGGTTTGGAGTACCTCCATGATAAAGCAAACCCTCCTGTTATATATCGAGACTTTAAGTCATCTAACATATTGCTAGACGAAGGATACCATCCAAAGCTCTCTGATTTTGGACTTGCAAAACTTGGACCTACTGGTGACAAGTCACATGTTTCTACTAGGGTAATGGGGACATATGGTTATTGTGCCCCTGAATATGCTATGACTGGACAATTGACTGTAAAGTCAGATGTATATAGTTTTGGAGTAGTGTTCTTAGAGCTGATAACTGGGCGTCGAGCCATTGACAGCACCCGACCTCATGGAGAGCAGAACCTTGTATCATGGGCACGTCCCTTGTTCAACGATCGTCGTAAATTTGTGAAATTGGCCGATCCTCGGCTGCAGGGCCGGTTTCCAACACGAGGTCTTTACCAAGCTCTGGCTGTTGCATCCATGTGCATCCAAGAAAATGGTGCTGCTCGTCCTCTTATTGGAGACGTTGTAACTGCCCTTTCTTATCTGGCAAACCAGGCCTACGACCCTAGTACTAGAGATGACCGAAGGAACAGAGAAGATGGTGCTGCGAAAATTGGCAGGGGTGAAGAAGGGGCAGTCTCAGGGCGCAAGTGGGACTTGGAAGGCTCGGAGAAAGATGACTCCCCTAGGGAAACAGCACGAATGTTGAACAGGGATTTAGATAGAGAACGTGCTGTTGCGGAGGCTAAAATGTGGGGAGAGAATTGGCGGGAGAAGCGGAGACAAACTTTGGATTCAGAAGGTGGATCTGAAAAGGACGACTCACCGAAAGAGACCGCAAGGATGTTGAACCGGGATTTGGAGAGAGAAAGAGCTGTCGCTGAGGCTAAGATGTGGGGAGAGAATTGGAGGGAAAAAAGAAGGCAAAGCGCTCGATCTGATGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54298.p1 GENE.S_Transcript_54298~~S_Transcript_54298.p1 ORF type:complete len:498 (+),score=106.65,Pkinase|PF00069.21|1.3e-44,Pkinase_Tyr|PF07714.13|1.8e-43 S_Transcript_54298:695-2188(+)
MGCFSCFESKEEERLNPPSKVKDDHRKDGLPSTNSNISKLSSGADRLKSRNAVGPRREPSVPKEGVPDNNISAQTFTFRELAASTKNFRDECFLGEGGFGRVYKGQLETGQVVAVKMLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSMGSLEDHLLDLPPDRDPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPHGEQNLVSWARPLFNDRRKFVKLADPRLQGRFPTRGLYQALAVASMCIQENGAARPLIGDVVTALSYLANQAYDPSTRDDRRNREDGAAKIGRGEEGAVSGRKWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQTLDSEGGSEKDDSPKETARMLNRDLERERAVAEAKMWGENWREKRRQSARSDE*

Click here to download the sequence:
Link to NCBI Protein BLAST