Transcript Information: S_Transcript_54315.p2


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value4E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8831194926937
Replicate 26.2410031622939
Replicate 35.1605821151359
Condition 2: 8 Hour
Replicate 17.564970265405
Replicate 26.8073362068893
Replicate 36.5512008694209
Condition 3: 24 Hour
Replicate 16.7471964298166
Replicate 25.7525882594399
Replicate 36.6718863640445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54315.p2 GENE.S_Transcript_54315~~S_Transcript_54315.p2 ORF type:3prime_partial len:654 (+),score=129.77,SHR-BD|PF06650.8|1.3e-22 S_Transcript_54315:6147-8105(+)
ATGTATTGTCGTCAATCTGTAAACCAGATGGACTTGATTGCTCAACAAGCCTCTTCAAGCAACTTGAACAGACACTTGGACTCTTACAATCAGTTAGATCTCAAAAGCTCGAACGTTCTCAATGACGAAAAGGTTTCAGATGTAATGAATAATGAGTGCCTAAAGGCTAAGCCATTCATGTATTCTCCTGACCCAGGTGTTGCTGCTAATGAAATAATGGTTCGAGTAAGCAGGTGCCGCACTGAATGTACCATAGAGAATTTACCTAGCACTTCATGGTCAAACTCATTTTTTCTTGTTGCACCTAGTGGATCCACTACGGTTTTGGTCCCACAGCCATCGTCAAATTCTGCAGCTGTTATATCAGTGACCTCACAGTTACTCGATGGCCCGCTGACAGGACGGACAAGAGCCATTACATTCCAGCCAAGATATGTTATCAGTAATGCATGCAGCAAGCCATTGTGTTATAAACAAAAGGGTACCAAAGTCACTTTCCATTTAGGTGTTGGACAACACTCTCATTTGCATTGGATCGACACAAGAAGGGAGTTACTTGTTGCTGTCCGTTTTGTTGAACCTGGATGGCAATGGTCAGGCAGTTTCCTACCTGATCATCTTGGTGACGCACAAGTGAAAATGCGTAATTATGATACTGGTGCGTTGAGAATTATAAGAGTGGAAGTACAGAATGCTGATATTATTCGAGATGAAAAGATTGTTGGTAACACCATTGGAAATTCAGGGACAATTTTCATCCTTCTGTCAGATGATGACACAGGATTTGTCCCATACAGAGTTGATAATTTTTCAAATGAGGTTCCTGGGGAACGCATAGTAGGATCATATATTCTTGATGATGTCAAGGAATATGCACCTGTACACTTGTCATCTTCATTGTCATTAGAGAAGCAGGAGAGGACATTGCTTTCATCGGTCCATGCAGAGGGTGCAATGAAGGTGCTCTGTATCTTTGATTCAAGCTGTCATGTTTTGGGAGAGCTGAAGAACTCAAGTTCTCTAACATTTCGCAAGAAGAGTGAAAGTAAAGAAGTGGAGGAGAATTTGAATGATTATGAGGAGAAAATCTCTGTCAGGGTATCCTATATTGGTGTCTCTTTAATAGATTCACATCCTCAGGAGTTGCTTTATGCTTCCATAGAGGACATAAAAGTTGATCTTCTCCAGAGTGTGAAGCAACAGAGGTTTTCCTTTCAAGTTGCATCCTTGCAAATTGACAATCAACTGCGTGGTACCCCATATCCTGTCATCTTGTCCTTCCATGAAGACTACAAAGGCAGCCTTGTTAGCCAAGTGAGAAATAAAGATGGAGGAAGAATGAGCAAATTTGAAAGCATGATCCCTTATGCTTCTGGGGCATCACATGAACCAGTATTTTGTTTTGTGGCTTCAAAATGGAGGAACAATGAGATGGCATTGGTTTCATTTGAAAATATTAGCTTAAGGATTGCTGAACTTTCCCTTGAGCTTGATCTGGAGCTTCTTTTGAAATTACTTGATTTTTGTAAGGCAAACCCTTTACTGAAGACCGAGATGCCAATTTCAATGTCCAGAGTTGATTCTTATGCACACAAGCTGGGAGTCGTGGATATATCTTGCTCTGTTGCATTGCAAGATTCACAACGCTTGCTTTGGAATGGAGACCTTCAGCTTCCAAAGATCGATTGTTCGCCTCCTGATTGCCACCACAGTAATCCATCGTTGCCAGAGATAGCTCCAATTGGAGCTCCTTTGCAGAAAATTTACCTTCTCGCAAGAAGACAAAACAAGATATATGTGGAATCCTTTTCTTTGGCCCCTGTTAAGGTTACTTTGAGTTTTTCAAGCAATCCATGGATGCTCAAAAAGGGGGGTTTGACATCAGGAGAGTCTTTCATCCATAGGGGTATTATGGCTTTCGCTGATGTTGAGGGGGCACAAATTTCCCTCAGGGAATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54315.p2 GENE.S_Transcript_54315~~S_Transcript_54315.p2 ORF type:3prime_partial len:654 (+),score=129.77,SHR-BD|PF06650.8|1.3e-22 S_Transcript_54315:6147-8105(+)
MYCRQSVNQMDLIAQQASSSNLNRHLDSYNQLDLKSSNVLNDEKVSDVMNNECLKAKPFMYSPDPGVAANEIMVRVSRCRTECTIENLPSTSWSNSFFLVAPSGSTTVLVPQPSSNSAAVISVTSQLLDGPLTGRTRAITFQPRYVISNACSKPLCYKQKGTKVTFHLGVGQHSHLHWIDTRRELLVAVRFVEPGWQWSGSFLPDHLGDAQVKMRNYDTGALRIIRVEVQNADIIRDEKIVGNTIGNSGTIFILLSDDDTGFVPYRVDNFSNEVPGERIVGSYILDDVKEYAPVHLSSSLSLEKQERTLLSSVHAEGAMKVLCIFDSSCHVLGELKNSSSLTFRKKSESKEVEENLNDYEEKISVRVSYIGVSLIDSHPQELLYASIEDIKVDLLQSVKQQRFSFQVASLQIDNQLRGTPYPVILSFHEDYKGSLVSQVRNKDGGRMSKFESMIPYASGASHEPVFCFVASKWRNNEMALVSFENISLRIAELSLELDLELLLKLLDFCKANPLLKTEMPISMSRVDSYAHKLGVVDISCSVALQDSQRLLWNGDLQLPKIDCSPPDCHHSNPSLPEIAPIGAPLQKIYLLARRQNKIYVESFSLAPVKVTLSFSSNPWMLKKGGLTSGESFIHRGIMAFADVEGAQISLREL

Click here to download the sequence:
Link to NCBI Protein BLAST