Transcript Information: S_Transcript_54316.p1


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9487855084787
Replicate 210.722103336362
Replicate 316.02966781098
Condition 2: 8 Hour
Replicate 14.7832651178616
Replicate 22.718075068378
Replicate 32.1913488192037
Condition 3: 24 Hour
Replicate 112.861940746798
Replicate 217.368528497761
Replicate 312.493162181973


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54316.p1 GENE.S_Transcript_54316~~S_Transcript_54316.p1 ORF type:complete len:107 (+),score=6.49 S_Transcript_54316:146-466(+)
ATGAGACTTCATACTAACTTCTCTGTAAGGCCTCAATTTTCATGCTCAATAATTCCTACCAAGACACCAACCTTAATCTCATACTCTTCATCACAACCTAGACTGCTTGTAACGCGAGTGCTAGCCCTATCTTCATCTTCCCCTAGCCAAAAAACCGAGGAAATTTTCAGTTCTTCAACCACCAAAGAAATTCAAGAATTGAAGAAAACAAGTTCTTACAATATTGAGTTCAAAACAAAGGGAGGTTGCAAGCTTGGGATCGCAAGATACCCAGATTTCGAATATAACGCAAATGGTGGGTACAGGAAGTGGAGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54316.p1 GENE.S_Transcript_54316~~S_Transcript_54316.p1 ORF type:complete len:107 (+),score=6.49 S_Transcript_54316:146-466(+)
MRLHTNFSVRPQFSCSIIPTKTPTLISYSSSQPRLLVTRVLALSSSSPSQKTEEIFSSSTTKEIQELKKTSSYNIEFKTKGGCKLGIARYPDFEYNANGGYRKWSR*

Click here to download the sequence:
Link to NCBI Protein BLAST