Transcript Information: S_Transcript_54319.p1


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value5E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30589656592162
Replicate 20
Replicate 30.21198547222529
Condition 2: 8 Hour
Replicate 10.24511942893256
Replicate 20
Replicate 30.24500974258599
Condition 3: 24 Hour
Replicate 10.25109061483442
Replicate 20.65125895334332
Replicate 30.86972566914193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54319.p1 GENE.S_Transcript_54319~~S_Transcript_54319.p1 ORF type:complete len:174 (+),score=28.22 S_Transcript_54319:146-667(+)
ATGAGACTTCATACTAACTTCTCTGTAAGGCCTCAATTTTCATGCTCAATAATTCCTACCAAGACACCAACCTTAATCTCATACTCTTCATCACAACCTAGACTGCTTGTAACGCGAGTGCTAGCCCTATCTTCATCTTCCCCTAGCCAAAAAACCGAGGAAATTTTCAGTTCTTCAACCACCAAAGAAATTCAAGAATTGAAGAAAACAAGTTCTTACAATATTGAGTTCAAAACAAAGGGAGGTTGCAAGCTTGGGATCGCAAAATACCCGGATTTCGAGTATAATGCAAATGGTGGGCTTGGTACAGGAAGTGGAGTAGATGACCAGAATGGGGATATTTTGGTTAATTTTAATGTGGAAAAGCTTTACATTCCACCATTAACAAGTGAGACAACCAAGTTCTTGGGGTTGCCATTGCCACCATTTTTGAGAATTGATATTGTGCCTGAAGTGTTTCAGGGAAGCATTGATAAAGAGTCTGGCAAGGTCAGTTTGACCTGTTCATTTGAGAACTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54319.p1 GENE.S_Transcript_54319~~S_Transcript_54319.p1 ORF type:complete len:174 (+),score=28.22 S_Transcript_54319:146-667(+)
MRLHTNFSVRPQFSCSIIPTKTPTLISYSSSQPRLLVTRVLALSSSSPSQKTEEIFSSSTTKEIQELKKTSSYNIEFKTKGGCKLGIAKYPDFEYNANGGLGTGSGVDDQNGDILVNFNVEKLYIPPLTSETTKFLGLPLPPFLRIDIVPEVFQGSIDKESGKVSLTCSFENC*

Click here to download the sequence:
Link to NCBI Protein BLAST