Transcript Information: S_Transcript_54353.p1


Annotated TAIR IDAT2G40360.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16853123-16856635 | Reverse length=753
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.771077381755
Replicate 228.769877582999
Replicate 331.475602916012
Condition 2: 8 Hour
Replicate 138.357268717083
Replicate 239.016504027683
Replicate 339.135896202746
Condition 3: 24 Hour
Replicate 122.340034183048
Replicate 222.391845837431
Replicate 321.926363936181


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54353.p1 GENE.S_Transcript_54353~~S_Transcript_54353.p1 ORF type:complete len:750 (+),score=161.98,BOP1NT|PF08145.8|4e+03,BOP1NT|PF08145.8|1.4e-93,WD40|PF00400.28|2.9e-07,WD40|PF00400.28|9.5e+03,WD40|PF00400.28|2.5e+03,WD40|PF00400.28|5.6e+02,WD40|PF00400.28|4.5e+02,WD40|PF00400.28|0.48,WD40|PF00400.28|0.015 S_Transcript_54353:198-2447(+)
ATGAAGGTCCCAAAGAAAGTAGCAACGGCCTGGAGTAAGGGTAAGGGTAAGGAAAAGAAGAAGGAAAACGATGAGGAACCTAAGGTCACTAAGAAAGCTACAATGGCGGCGACTACTAAGAATGTGAAAAAGAAGGAGAAACAGAAGAGTATTGAGGAGCAAAAAGTGAACAAACGGTTGCAGAAGCTTGGACTACGTCATCAACAGGAAGAAGAACCTCATCATTCGGATTATTCTGAAGTGAGTGAACCTGTGGATAGCGATGCCGGTTCTTCTGAAGATGAGTTACGTGGAGCTCATTCATTCTATGGTAGTGACCATAGTCACAAGGCTAATGGTGCAAATACTTGTGACGGTGATGAGGATGATGCCTATTATTCCGTGGAAGAGAGTGATTCATCTGATGATGAGGTTGCTCCTCGGAATACAATTGGCGATGTTCCTTTAGAATTTTACAAAGATGAGGAACATATTGGATATGAAATTACCAGGAAGAAGATCAAGAAGGAGAGGGAAGATAAACTCCAAAAATATCTTAGAAGTGCTGATGATAAGAAAGCCTGGCGGACGATTATAGATGAACACAATGACGAAGAAGTGTACTTGACAAAAGATCAGATTAAGCTGTTTTACCGTATGTCGAAAGGGAAGACTCCACATGCTGATGTGAACCCTTATCAGGATTATCTAGACTGGTTTGATCATGAAGACAAGGGTCATCCATTATCAAATGCACCAGAACCAAAGGGACGATTCATACCCTCAAAGTGGGAGCACAAACAGATCCTCAGGTACGTGAGGGCCATTCGTGCGGGCAGAATCAAGTTTGATAAACCCAAGGAAGAGCCAAGTGTCTATCTATTATGGGGTGATGACTCTGGTTCATCGGAAAAGACTAGGGGATTGTCTTATATTCCTCCTCCAAAACCTAAACTGCCTGGCCACGAGGAATCTTATAATCCTTCTTTAGAATACATACCAACACAAGAAGAAATCAATTCTTACCAGTTGATGTACGAGGAGGACAGGCCTAAATTCATTCCCAAGAGGTTCACATCTTTGAGAAGTGTCCCAGCATATGAGAACTTTACCAAGGAGATTTTTGACCGTTGTTTGGACTTGTATCTTTGTCCTAGAGTTCGTAAGAAACGTATTGATATCGATCCTGAAACCTTAAAGCCTAAAACACCAAATCGTAAAGATCTTAAGCCTTATCCCGTTACATGTTATATTGAGTACAAGGGACACAATGATGCTGTTGTGTCTATTTCGATCGATGCTTCTGGCCAATGGATGGCTTCTGGTTCAACTGATGGAACTGTACGTCTTTGGGAGGTTGCCACTGGTAGATGCATCCGTGTCTGGGAATTTGGTGATGCTGTACGACATGTTGCATGGAATCCTGTACATGAGCTTTCAATATTGGCAGTCTCTGTGGGTCAAGATGTATTTATTCTAGATACTGGGTTGGGGAGTGAAGTAGAGCAGAAGAAGATTAAAGAACTCTTGCATATTGAGAAAGCTAATGTTCCAGATGAATCAGATAGCACACCTATTGCAAGCTGGCTTACTTTTGACAAACATGGAGGTCTAAGATTAAAGCATTTTAAGACTGTGTCTTCTATAGAATGGCATCGTAAGGGAGACTATCTGTCAACAGTGATGCCAGCAGCTGAATCTCGAGCTGTATTGATACACCAGCTCTCGAAGAAACTCACACAAAAGATCCCATTTAAGTTGCATGGAATTCCAGTGTGTGTAGCATTCCATCCATCTCGTTCCATTTTCTTCATTTCAACAAAGAAGGTTGTTCGTGTTTACGATTTGCTGAAGGAGAAACTGATCAAGAAGCTTGAGACCGGACTTCGTGAAGTTTCAAGCATTGCAATCCATCCCGGTGGTGACAATGTCATTGTTGGGAGCAAAGAAGGAAAGTTGTGTTGGTTTGACATGGATCTCCAATCTCGGCCTTATAGGGTCCTTAAGATTCACCCAAAGGATATCACAAATGTGGCCTTTCATCGTTCATATCCTCTGTTTGCATCATGCTCTGAAGATAACACGGCATATGTTTACCATGGCATGGTTTATTCAGATCTGAACCAAAATCCTCTAATTGTTCCATTGCAAATACTTCGAGGGCATTCTAGCTTGAAATCAAGAGGAGTTCTAGATTGTAAGTTTCATCCAAGGCAACCCTGGTTGTTCACTGCTGGTGCTGATTCAGTGATTAAACTTTATTGCCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54353.p1 GENE.S_Transcript_54353~~S_Transcript_54353.p1 ORF type:complete len:750 (+),score=161.98,BOP1NT|PF08145.8|4e+03,BOP1NT|PF08145.8|1.4e-93,WD40|PF00400.28|2.9e-07,WD40|PF00400.28|9.5e+03,WD40|PF00400.28|2.5e+03,WD40|PF00400.28|5.6e+02,WD40|PF00400.28|4.5e+02,WD40|PF00400.28|0.48,WD40|PF00400.28|0.015 S_Transcript_54353:198-2447(+)
MKVPKKVATAWSKGKGKEKKKENDEEPKVTKKATMAATTKNVKKKEKQKSIEEQKVNKRLQKLGLRHQQEEEPHHSDYSEVSEPVDSDAGSSEDELRGAHSFYGSDHSHKANGANTCDGDEDDAYYSVEESDSSDDEVAPRNTIGDVPLEFYKDEEHIGYEITRKKIKKEREDKLQKYLRSADDKKAWRTIIDEHNDEEVYLTKDQIKLFYRMSKGKTPHADVNPYQDYLDWFDHEDKGHPLSNAPEPKGRFIPSKWEHKQILRYVRAIRAGRIKFDKPKEEPSVYLLWGDDSGSSEKTRGLSYIPPPKPKLPGHEESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPKRFTSLRSVPAYENFTKEIFDRCLDLYLCPRVRKKRIDIDPETLKPKTPNRKDLKPYPVTCYIEYKGHNDAVVSISIDASGQWMASGSTDGTVRLWEVATGRCIRVWEFGDAVRHVAWNPVHELSILAVSVGQDVFILDTGLGSEVEQKKIKELLHIEKANVPDESDSTPIASWLTFDKHGGLRLKHFKTVSSIEWHRKGDYLSTVMPAAESRAVLIHQLSKKLTQKIPFKLHGIPVCVAFHPSRSIFFISTKKVVRVYDLLKEKLIKKLETGLREVSSIAIHPGGDNVIVGSKEGKLCWFDMDLQSRPYRVLKIHPKDITNVAFHRSYPLFASCSEDNTAYVYHGMVYSDLNQNPLIVPLQILRGHSSLKSRGVLDCKFHPRQPWLFTAGADSVIKLYCH*

Click here to download the sequence:
Link to NCBI Protein BLAST