Transcript Information: S_Transcript_54367.p1


Annotated TAIR IDAT2G34840.1
Annotated Gene NameCoatomer epsilon subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14702603-14704165 | Forward length=293
E-Value2E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1140.33984042358
Replicate 2137.33895644972
Replicate 3130.18401941365
Condition 2: 8 Hour
Replicate 1148.6136197187
Replicate 2143.98490820032
Replicate 3145.22804129484
Condition 3: 24 Hour
Replicate 1120.56259227508
Replicate 2124.69017441658
Replicate 3120.61199089228


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54367.p1 GENE.S_Transcript_54367~~S_Transcript_54367.p1 ORF type:complete len:289 (+),score=62.66,Coatomer_E|PF04733.10|1.2e-128,TPR_12|PF13424.2|1.4e+04,TPR_12|PF13424.2|6.9e+03,TPR_12|PF13424.2|69,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|5.7e-05,TPR_12|PF13424.2|0.00018,TPR_12|PF13424.2|7.9e+02,TPR_16|PF13432.2|66,TPR_16|PF13432.2|0.0001,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|1.9e+03,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|14,TPR_2|PF07719.13|0.0031,TPR_2|PF07719.13|2.7e+02,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3e-05 S_Transcript_54367:299-1165(+)
ATGGCGACTCCAGATCTTCTATTCAATCTGCGCAACAACTTCTACTTGGGAGCTTACCAAGCAGCCATTAACAACAGCGACATACCCAATCTCTCCCCTGAAGAAGCTATTGAACGAGATTGCCTCGTGTACAGATCCTACATTGCTCTCGGCAGCCACCAGCTTGTGATCAATGAAATCGATTCTTCTGCTGCCACGCCTCTTCAAGCAGTGAAGTTGCTGGCTCTTTACCTTTCGGGCTCCGATAAGGAATCAGCAATTTCCAGTTTGAAGGAGTTGTTGGCAGACCTTGCTATTGCAAACCTGCCAACTTTGCGGCTTGTTGCTGGTATCATATTCATGCATGAACAAGACTACACAGAAGCTTTGAAACATACTAACGCTGGAGGAACCATGGAACTGCATGCATTGAATGTCCAAATATACCTCAAGATGTACAGATCAGATCACGCAGAGAAACAGCTAAAGATTATGCAACAAGTTGACGAGGATCACACATTAACACAACTCGCAAATGCTTGGCTGAATTTGGCAGTGGGTGGTTCCAAGATACAAGAAGCGTATCTCATCTATCAGGATTTCTCTGAGAAGTATCCAATGACTGGATTGATTCTGAATGGGAAAGCTGTTTGTTGCATGCATATGGGAAACTTTGATGAAGCAGAATCATTGTTACTTGAAGCACTGAATAAGGATGCTAAAGATGCTGAAACCCTGTCGAATTTGGTTGTGTGCTGTCTTCATCTTAATAAACAAGCTACTCGTTACCTGAGCCAGTTGAAGGTTACTCATCCGGAGCACATGTTTGTGAGGCGTTTATCTGCTGCAGAAGAGAGTTTCGAAAGAGCAGTACAATCTGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54367.p1 GENE.S_Transcript_54367~~S_Transcript_54367.p1 ORF type:complete len:289 (+),score=62.66,Coatomer_E|PF04733.10|1.2e-128,TPR_12|PF13424.2|1.4e+04,TPR_12|PF13424.2|6.9e+03,TPR_12|PF13424.2|69,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|5.7e-05,TPR_12|PF13424.2|0.00018,TPR_12|PF13424.2|7.9e+02,TPR_16|PF13432.2|66,TPR_16|PF13432.2|0.0001,TPR_16|PF13432.2|0.03,TPR_16|PF13432.2|1.9e+03,TPR_2|PF07719.13|3.8e+03,TPR_2|PF07719.13|1.1e+04,TPR_2|PF07719.13|14,TPR_2|PF07719.13|0.0031,TPR_2|PF07719.13|2.7e+02,TPR_19|PF14559.2|4.3e+03,TPR_19|PF14559.2|87,TPR_19|PF14559.2|3e-05 S_Transcript_54367:299-1165(+)
MATPDLLFNLRNNFYLGAYQAAINNSDIPNLSPEEAIERDCLVYRSYIALGSHQLVINEIDSSAATPLQAVKLLALYLSGSDKESAISSLKELLADLAIANLPTLRLVAGIIFMHEQDYTEALKHTNAGGTMELHALNVQIYLKMYRSDHAEKQLKIMQQVDEDHTLTQLANAWLNLAVGGSKIQEAYLIYQDFSEKYPMTGLILNGKAVCCMHMGNFDEAESLLLEALNKDAKDAETLSNLVVCCLHLNKQATRYLSQLKVTHPEHMFVRRLSAAEESFERAVQSVA*

Click here to download the sequence:
Link to NCBI Protein BLAST