Transcript Information: S_Transcript_54442.p1


Annotated TAIR IDAT3G26100.2
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9538063-9540149 | Forward length=532
E-Value3.4E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.000980891437
Replicate 228.766675726918
Replicate 328.772341100946
Condition 2: 8 Hour
Replicate 154.740004170056
Replicate 251.947331081814
Replicate 351.67038795856
Condition 3: 24 Hour
Replicate 134.476278706244
Replicate 231.349036420798
Replicate 331.627642984193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54442.p1 GENE.S_Transcript_54442~~S_Transcript_54442.p1 ORF type:complete len:441 (+),score=73.90,RCC1|PF00415.14|6.7e+03,RCC1|PF00415.14|4e-10,RCC1|PF00415.14|0.0036,RCC1|PF00415.14|0.63,RCC1|PF00415.14|4.6e-06,RCC1|PF00415.14|8.2e-14,RCC1|PF00415.14|4.5e-06,RCC1|PF00415.14|0.00057,RCC1_2|PF13540.2|1.2e-07,RCC1_2|PF13540.2|0.0053,RCC1_2|PF13540.2|0.026,RCC1_2|PF13540.2|22,RCC1_2|PF13540.2|0.047,RCC1_2|PF13540.2|3.5e-05,RCC1_2|PF13540.2|0.45 S_Transcript_54442:983-2305(+)
ATGTGCCAAAAGAGGGTTATATTTAAACCGATGACCCCTGAAGAAAGGGAGGATTTGAAGCAAAAATGTGGAGGGTCTTGGAAATTAGTGCTTAGGTATTTGTTGGCTGGAGAAGCCTGTTGTAGGAGAGAAAAATCGCAGGCAATTGCTGGGCCTGGTCACAGTATTGCTGTGACATCGAATGGAGCTGTTTATTCGTTCGGTTCTAATAGCTCGGGACAGCTTGGTCATGGCCTGATGCCTGATGGTACCACAGCTGATGAGTGTCGGCCTCGCTTGATAAGATCCCTGCAAGGAATTCGGATCATACAAGCTGCTGCTGGGGCTGGCAGGACAATGCTGATTAGTGATGCTGGGAAGGTTTATGCTTTCGGGAAAGACACGTTCGGGGATTCTGAGCCTGTTGCTCAAGGTCCCCGAACAGTGAACACCCCACGGCTTGTCGAGTCCTTGAAGGACATATTTGTTGTGCAAGCTGCTATTGGGAATTTCTTCACTGCTGTGTTGTCAAGAGAAGGAAGAATTTATACGTTTTCTTGGGGCAGTGACGATAGGCAAGGTCACCATACGGATCCAAATGATTTACAACCACGCCCTTTGTTGGGGGCGCTTGAGAATATTCCGGTTGTGCAGATTGCTGCTGGATATTGCTACCTTCTCGCCCTCGCTTGTCAACCTAGTGGCATGTCAGTGTATTCATTGGGGTGTGGATTGGGAGGAAAGCTCGGCCATGGCTCAAGAACAGATGAAAAATACCCACGATTGATCGAACAATTCCAAAAATTGAACCTTCAGCCTATGGTTGTGGCAGCTGGTGCTTGGCACGCAGCTGTTGTCGGCTATGATGGAAGAGTATGCACGTGGGGTTGGGGCCGTTATGGATGTTTAGGACATGGGAATGAAGATTGTGAGTCCGTTCCAAGGGTGGTGGATGCCTTGAGCAATGTCAAGGCAGTCCATGTTGCCACAGGCGATTACACCACGTTTGTGTTATCTGACAATGGCGATGTATATTCATTCGGTTGTGGTGAATCCTCTAGCCTCGGGCACAATTGTGCTGGGGCTGACGGCCAGCAGGGGCAAAGGCATGCGAATGTACTAAAGCCAGAGCTAGTAACATCGCTAAAGCAAGTGAATGAGCGGGTGGTGCAAATCAGCTTGACCAATTCCATATTCTGGAATGCTCACACCTTTGCTCTCATTGAATCAGGAAAGCTCTACTCATTCGGGGCGGGTGACAAAGGGCAGCTGGGTGTAAAGCTTGGTGAGAACCAGCTCGAAAGGGGCAATCCGGAGCTGGTCGAAATTGACCTTAGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54442.p1 GENE.S_Transcript_54442~~S_Transcript_54442.p1 ORF type:complete len:441 (+),score=73.90,RCC1|PF00415.14|6.7e+03,RCC1|PF00415.14|4e-10,RCC1|PF00415.14|0.0036,RCC1|PF00415.14|0.63,RCC1|PF00415.14|4.6e-06,RCC1|PF00415.14|8.2e-14,RCC1|PF00415.14|4.5e-06,RCC1|PF00415.14|0.00057,RCC1_2|PF13540.2|1.2e-07,RCC1_2|PF13540.2|0.0053,RCC1_2|PF13540.2|0.026,RCC1_2|PF13540.2|22,RCC1_2|PF13540.2|0.047,RCC1_2|PF13540.2|3.5e-05,RCC1_2|PF13540.2|0.45 S_Transcript_54442:983-2305(+)
MCQKRVIFKPMTPEEREDLKQKCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGLMPDGTTADECRPRLIRSLQGIRIIQAAAGAGRTMLISDAGKVYAFGKDTFGDSEPVAQGPRTVNTPRLVESLKDIFVVQAAIGNFFTAVLSREGRIYTFSWGSDDRQGHHTDPNDLQPRPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSLGCGLGGKLGHGSRTDEKYPRLIEQFQKLNLQPMVVAAGAWHAAVVGYDGRVCTWGWGRYGCLGHGNEDCESVPRVVDALSNVKAVHVATGDYTTFVLSDNGDVYSFGCGESSSLGHNCAGADGQQGQRHANVLKPELVTSLKQVNERVVQISLTNSIFWNAHTFALIESGKLYSFGAGDKGQLGVKLGENQLERGNPELVEIDLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST