Transcript Information: S_Transcript_54562.p2


Annotated TAIR IDAT5G14090.1
Annotated Gene Nameunknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4547230-4549214 | Forward length=358
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13535453716267
Replicate 30
Condition 2: 8 Hour
Replicate 10.3924918463276
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.30947293748609


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54562.p2 GENE.S_Transcript_54562~~S_Transcript_54562.p2 ORF type:complete len:163 (-),score=50.57 S_Transcript_54562:2145-2633(-)
ATGCCAGAGATGAAATATGACTTGAAGCTCATCAATGATGAGTTGGAGAAGTTTCTCAGGGCTGAAGCTGAAAAGGAAGGGAACAATGGAGTAGCAGGTAGGGTCAGTGAAGCAAGTGCTGTTACCCTTGTTGAAAAGGAAAAGGAAGAAGTGGATGAGCACATGGATGTGAAACTGCAAGCATATCCTTTGCAAGGATATCTTCTAGGGTCATCCACTGAACCCCTGCAAACTAAACAACAGAAAAAGAAAGAAAAGAAATTCTTGCAGGAGCTATTTCAGAATAGCAGAATGGCAACCAGAAGCTCCAACAAAAAGGTTGACCGAACCCACAAACAAGCTGAGAAGGAATCAAAACCATCCACTAATCTCACGAACAAGATGTTGCAAACATCTGAAACTTGTGCAGCTGATTCCTTTCCAACCAGGATGAAACTTAATAAGGTAACTCTTTTAGCACTCCATGTCACCTCAGTCAAAGTAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54562.p2 GENE.S_Transcript_54562~~S_Transcript_54562.p2 ORF type:complete len:163 (-),score=50.57 S_Transcript_54562:2145-2633(-)
MPEMKYDLKLINDELEKFLRAEAEKEGNNGVAGRVSEASAVTLVEKEKEEVDEHMDVKLQAYPLQGYLLGSSTEPLQTKQQKKKEKKFLQELFQNSRMATRSSNKKVDRTHKQAEKESKPSTNLTNKMLQTSETCAADSFPTRMKLNKVTLLALHVTSVKVN*

Click here to download the sequence:
Link to NCBI Protein BLAST