Transcript Information: S_Transcript_54589.p1


Annotated TAIR IDAT5G16280.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5323377-5331345 | Reverse length=1272
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5830523705833
Replicate 28.6161359840295
Replicate 39.1784113583757
Condition 2: 8 Hour
Replicate 110.944163819585
Replicate 211.35961879688
Replicate 312.544574910385
Condition 3: 24 Hour
Replicate 19.8878626358823
Replicate 29.3435434371432
Replicate 39.1057846648905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54589.p1 GENE.S_Transcript_54589~~S_Transcript_54589.p1 ORF type:complete len:1288 (+),score=259.64,TRAPPC-Trs85|PF12739.3|3.8e-87,TRAPPC9-Trs120|PF08626.7|1.7e+03,TRAPPC9-Trs120|PF08626.7|1.4e-05 S_Transcript_54589:244-4107(+)
ATGGTGGATCCGGCAAATACGACGCTAGGGAAGATGTTGATGAAGGAGATAACGCCAGTAGTGATGGTGCTATGTACACCACTCGTTGAACAAGCTTGTAAGAAGAATGGCCTCAACTTCGTTGACATGCTCTCTCCTTTCTCCGTCTTTGATAACATTGACGTACCTGTACGGACCGCAAGTGATCAGCCTTATAGGCTTCAAAAGTTCAAATTAAGATTGTTCTATGCTTCTGATATTCGGAAGCCAGAATTTGAGGCAGCAAGAGCTCGGCTGAACAACGTGGTTACTGGAACTGCGGACAAGGAAAATTCGGACAATTGTTTGGAGCTCCATGACAATGAAAATATTTCCGCGATTTCGAAGTCAGAATTATTACCATCATGGTTCCAGATCTTCAATGAAGAGCTTATATGTGCCTCATCATTTTCTGACCATGAAGCTTTTGACCATCCAGTGGCTTGTCTTTTGGCTGTTTCGTCAAAGGATGAAGAGCCAATCAATAAATTAGTTGACCTTTTCAACACAAACAAACTTCCCTCTCTTCTGAATGATGGTGTCATGGATCCAAAGATTTTGAAACACTATGTGGTGTTGCATGATAATCAAGATGGTCCTGCAGAGGAAGCATCAAAGATTTTATCGGAGATGAAAAACACATATGGCATAAATGATTGTCAATTGCTCTGCATCAACTCGCTGCAAGATGGATCAGTGGGAAGTCCAGTTAACCCATGGACCTCTGGTAAATTAGATGCTCAAGCAGAGGAACATCTTGGCTGCTTTCTGAATACTGATGACATCGATGAGATAAAGATTCTCATGCAAGATTTAACAACTAAACATGTAATTCCTCACATGGAACAAAAAATACGGATGCTAAATCAGCAGGTGTCTGCTACAAGGAAAGGTTTCAGGAACCAAATAAAAAATCTATGGTGGAGAAAGGGGAAGGAAGATGCACCAGATACTCCGGATGGTCCAGCGTATACTTTTAGCTCAACAGAATCACAAATCAGAGTTTTGGGTGACTATGCCTTCATGCTACGGGACTATGAGCTTGCATTATCAAACTACCGACTTATTTCCACAGACTATAAGCTTGATAAAGCATGGAAACGTTATGCTGGTGTACAGGAAATGATGGCTCTGACGTACTTCATGTTGGACCAGTCAAGAAAGGAAGCAGAGTACTGCATGGAAAGTGCATTCACTACATATATAAAACTTGGTTCAAGAGGTCGGCAAAATGCCATTCGTTGTGGGCTTTGGTGGGTTGAAATGCTAAAAGCGAGGGAACAGTATAAGGAGGCAGCCAGTGTTTACTTCCGTGTTTCTGGTGAGGAACCACTGCAGTCTGCAGTAATGCTTGAGCAAGCATCTTATTGTTACTTATTCTCAGTGCCACCAATGTTACGCAAGTATGGATTTCATCTCATTCTCTCAGGCGATTCCTATAAAAAATCTGATCAGATGAAGCATGCTATTCGGACATATAAGACTGCTCTTTCGGTATTCAAGGGGACTTCATGGGGGCTTATTAGAGATCATATACATTTTCAGCTTGGCAAGTGGTTTGCATTCCTTGGAATGTTTGATGTGGCAATTGAGCATATGCTGGAAATTCTAGCCTGTACTCATCAAACCAAGGCAGCGCAGGAGTTATTCCTTGGAGATTTTCTCCAACTTGTTCAGAAAACAGGGAAAACATTTGAGGTTTGCAGACTTCGTTTGCCTGTTGTCAAGCTTCCTTCACTCAGAATTGTTTTTGAAGACCATCGAACGTATGCATCACCTGCTGCTGTTGCTGTAAGAGAGAGCGTTTGGAGGTCTCTGGAGGAAGAAATGATCCCGTCATTGTCAACTGCCAAGAGTAATTGGTTGGAATTACATACGAAGCTTGTGGCAAAGAAGTATAAAGAATCAAACGTTTGTGTAGCTGGGGAAGCAGTAAAGGTTGACATTGGATTCAAAAACCCACTTCAAATCCCAATTGCGGTCTCTAATGTTTCTCTGATATGTAAGCACTACACAAGGAGTGAAGAAATGGAAGCAGATGAAATTGGGTCTTCCACCAATTTACAAAATGACGAGCAGTTGAGGAAACTAATTGCTGGAAGTGATGTAAAAGCAAATGATTCTCTGTTTACATTGTCTGAAGTTGACTTTTCTCTCAATGGTTGCGAGACCCTTGTGGTACAGTTAGCTGTTACTCCTAGTGTGGAAGGGATGCTGAAATTAGTTGGGGTTAGATGGAAACTGTCAGGTTCTGTGGTTGGCTTTCAGATTTTTGACTCTGAGCAACTGAAGAAAAAGGTTGCAAAAAGGAGAAAATCCAAGCAATCTTATGGAAATGACCTCAAGTTCTTGGTTATAAAGTCTCTGCCAAGGCTTGAAGGTTCCATCCGTCACCTCCCCAAAAAATCTTATCTTGGAGAAATGCATCGTCTTGTTTTGGAGTTGAAAAACAGATCAGACTTTCCTGTGAAGAATTTGAAAATGAAGATCAGTCATCCAAGATTTGTCACTACCAGGAGTTGGGAAGCTTTGGATCTAGAATTTCCTACTTGCCTCCGGAAGGAGAATTTTGAGGAACATGTTGCTGCAGTTAGCTGTGATCAAACCCTTTCTTATTTCCAGTTTCCTGAGGATCTGGTTATTCAAGGAGAAGAGCCAGTTTTGTGGCCTCTATGGTTCAGAGCTGCTCTTCCTGGAGCAATCTCTTTGTACACGACACTTTATTATGAAGTGGGAGATGTATCAGGCATCATACGATATCGTACTCTTCGTATTTGTCAAAATTTTGAGGTCATGCCATCATTGGATGTATCGTTTCAAATACGCCGCTGCCCATCAAAATTGCGGGAATTCCTTGTACACATGGATCTTGTGAATAAAACTAGTTCGCAAAGTTTCGAGGTTCAGCAATTGTCTTGTTTAGGATATCAGTGGGACATCACAATGCTTCAGCCTGTCAACATCCCATCACCTATAATGGCAGGGCAAGCATTATCCTGCTTTTTCAAGCTTCAGAATGTCAGCAGAACTGCTTCTTCCGAGGATCAGGTTATTTCTCATATTGATAGGAGAGGAAGTCATGTAAGATTAGGCGGTCAGGTTGGCAATAAAGATTTGCTCGATATATCTCGCTCACCTATGGTTGATTTCCATCATCATGAAAGATTGCAGGAAGGGACTTCTGAACAGAGTCATTCTGAAACTGTGGACTTTATCTTAATTTCTCATCCACGTGATTATGATAGCACGGAGTCTGCAGATCACTCTTGCCTTTTCTCTCATTATGCATGTAATTGCAGTGTTGCTAGTAGCGGCCCCCTTTCTTGGCTGATGGATGGGCGCCGAACTATTCACCATGACTTTTCAACTTCTTTCTGTGAAGTAAATCTGAGTATGAGGATCCATAACTCTCTAGATTCTACTGTATCTGTGCGCATTGACACAAATAGTTCTGGTCCGAGCTCCAGCCAATCAACTCATTCAAGTGGAGTCAGTTCTGAAAATCAAGCTGGATGGCATGATGTCTCTTTGGCTAATGACATTAAGATCACCTCAGACACCCTTGGAAGCACTCGATCAGCACAGCAAACCCAACTAGAGAGTGTCTCACCATTCATGTGGTCTGGATCAAGCTGTACCAAAGTCGAGCTGTTGCCAGTGTCCACAATGGAGGTTCCTCTCCAGATTTGTGTATTTACCCCAGGCATTTATGATATATCTAATTATTACTTGCACTGGGAGGTGGTGCAATCAGATGGTGGAATTCTTGATGCTGGAGACTCAAGACCGTCTTCTGGGACATATCCAGGACAATCCTTTTACCTTACTGTCCTGCAGTCTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54589.p1 GENE.S_Transcript_54589~~S_Transcript_54589.p1 ORF type:complete len:1288 (+),score=259.64,TRAPPC-Trs85|PF12739.3|3.8e-87,TRAPPC9-Trs120|PF08626.7|1.7e+03,TRAPPC9-Trs120|PF08626.7|1.4e-05 S_Transcript_54589:244-4107(+)
MVDPANTTLGKMLMKEITPVVMVLCTPLVEQACKKNGLNFVDMLSPFSVFDNIDVPVRTASDQPYRLQKFKLRLFYASDIRKPEFEAARARLNNVVTGTADKENSDNCLELHDNENISAISKSELLPSWFQIFNEELICASSFSDHEAFDHPVACLLAVSSKDEEPINKLVDLFNTNKLPSLLNDGVMDPKILKHYVVLHDNQDGPAEEASKILSEMKNTYGINDCQLLCINSLQDGSVGSPVNPWTSGKLDAQAEEHLGCFLNTDDIDEIKILMQDLTTKHVIPHMEQKIRMLNQQVSATRKGFRNQIKNLWWRKGKEDAPDTPDGPAYTFSSTESQIRVLGDYAFMLRDYELALSNYRLISTDYKLDKAWKRYAGVQEMMALTYFMLDQSRKEAEYCMESAFTTYIKLGSRGRQNAIRCGLWWVEMLKAREQYKEAASVYFRVSGEEPLQSAVMLEQASYCYLFSVPPMLRKYGFHLILSGDSYKKSDQMKHAIRTYKTALSVFKGTSWGLIRDHIHFQLGKWFAFLGMFDVAIEHMLEILACTHQTKAAQELFLGDFLQLVQKTGKTFEVCRLRLPVVKLPSLRIVFEDHRTYASPAAVAVRESVWRSLEEEMIPSLSTAKSNWLELHTKLVAKKYKESNVCVAGEAVKVDIGFKNPLQIPIAVSNVSLICKHYTRSEEMEADEIGSSTNLQNDEQLRKLIAGSDVKANDSLFTLSEVDFSLNGCETLVVQLAVTPSVEGMLKLVGVRWKLSGSVVGFQIFDSEQLKKKVAKRRKSKQSYGNDLKFLVIKSLPRLEGSIRHLPKKSYLGEMHRLVLELKNRSDFPVKNLKMKISHPRFVTTRSWEALDLEFPTCLRKENFEEHVAAVSCDQTLSYFQFPEDLVIQGEEPVLWPLWFRAALPGAISLYTTLYYEVGDVSGIIRYRTLRICQNFEVMPSLDVSFQIRRCPSKLREFLVHMDLVNKTSSQSFEVQQLSCLGYQWDITMLQPVNIPSPIMAGQALSCFFKLQNVSRTASSEDQVISHIDRRGSHVRLGGQVGNKDLLDISRSPMVDFHHHERLQEGTSEQSHSETVDFILISHPRDYDSTESADHSCLFSHYACNCSVASSGPLSWLMDGRRTIHHDFSTSFCEVNLSMRIHNSLDSTVSVRIDTNSSGPSSSQSTHSSGVSSENQAGWHDVSLANDIKITSDTLGSTRSAQQTQLESVSPFMWSGSSCTKVELLPVSTMEVPLQICVFTPGIYDISNYYLHWEVVQSDGGILDAGDSRPSSGTYPGQSFYLTVLQST*

Click here to download the sequence:
Link to NCBI Protein BLAST