Transcript Information: S_Transcript_54624.p1


Annotated TAIR IDAT4G05320.2
Annotated Gene Namepolyubiquitin 10
Annotated Gene Symbol(s)UBQ10
Annotation TypeOrtholog
Chromosome Positionchr4:2718559-2719932 | Forward length=457
E-Value4.9E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.101973758573
Replicate 229.893717949843
Replicate 329.997907148326
Condition 2: 8 Hour
Replicate 123.958154553816
Replicate 226.307636826345
Replicate 321.25005795188
Condition 3: 24 Hour
Replicate 137.689166269266
Replicate 235.954318364946
Replicate 333.162317643764


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54624.p1 GENE.S_Transcript_54624~~S_Transcript_54624.p1 ORF type:3prime_partial len:324 (-),score=70.07,ubiquitin|PF00240.19|1.1e-30,ubiquitin|PF00240.19|5.3e-31,ubiquitin|PF00240.19|7.3e-32,ubiquitin|PF00240.19|8.6e-32,ubiquitin|PF00240.19|64,Rad60-SLD|PF11976.4|2.7e-15,Rad60-SLD|PF11976.4|4e-15,Rad60-SLD|PF11976.4|6.8e-15,Rad60-SLD|PF11976.4|2.2e-15,Rad60-SLD|PF11976.4|1e+02,Ubiquitin_2|PF14560.2|0.0022,Ubiquitin_2|PF14560.2|0.0021,Ubiquitin_2|PF14560.2|0.0015,Ubiquitin_2|PF14560.2|0.00055,Rad60-SLD_2|PF13881.2|0.66,Rad60-SLD_2|PF13881.2|0.57,Rad60-SLD_2|PF13881.2|0.14,Rad60-SLD_2|PF13881.2|0.17,DUF2407|PF10302.5|1.8,DUF2407|PF10302.5|1.3,DUF2407|PF10302.5|0.89,DUF2407|PF10302.5|2.6,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|9.6,DUF2870|PF11069.4|9.6,TmoB|PF06234.8|17,TmoB|PF06234.8|8,TmoB|PF06234.8|4.4,TmoB|PF06234.8|8.2,Telomere_Sde2|PF13019.2|4.2,Telomere_Sde2|PF13019.2|7.8,Telomere_Sde2|PF13019.2|8.1,Telomere_Sde2|PF13019.2|7,Methyltrans_RNA|PF04452.10|2.8,Methyltrans_RNA|PF04452.10|1.9,Methyltrans_RNA|PF04452.10|2,Methyltrans_RNA|PF04452.10|1.3e+02 S_Transcript_54624:3-971(-)
ATGCAAATCTTTGTCAAGACTCTGACCGGAAAGACAATCACTCTTGAAGTAGAGAGCTCGGACACCATTGACAATGTCAAGTCTAAGATTCAGGATAAGGAAGGTATCCCGTTTGACCAGCAGAGGCTCATCTTTGCTGGCAAACAACTCGATGATGGTCGTACCCTTGCTGATTACAACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGTCTTCGTGGTGGGATGCAAATCTTTGTCAAGACTCTTACCGGAAAGACAATCACTCTTGAAGTAGAGAGCTCGGACACCATCGACAACGTCAAGGCTAAGATTCAGGATAAGGAAGGTATCCCGTTTGACCAGCAGAGGCTCATCTTTGCTGGCAAACAACTCGATGATGGTCGTACCCTTGCTGATTACAACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGTCTTCGCGGTGGGATGCAAATCTTTGTTAAGACTCTAACCGGAAAGACTATAACATTGGAAGTTGAGAGCTCGGACACCATTGACAACGTCAAGGCAAAGGTCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGAGGCTCATCTTCGCCGGGAAACAGCTTGAGGATGGAAGGACTTTGGCTGACTACAACATTCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTACGTGGTGGTATGCAGATCTTCGTGAAGGCCCTGACCGGAAAGACCATCACCTTGGAAGTTGAGAGCTCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAGAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGGCGTACCTTGGCTGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGTCTGCGTGGTGGTATGCAGATCTTCGTGAAGACCCTGACCGGAAAGACTATCACCTTGGAAGTTGAGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54624.p1 GENE.S_Transcript_54624~~S_Transcript_54624.p1 ORF type:3prime_partial len:324 (-),score=70.07,ubiquitin|PF00240.19|1.1e-30,ubiquitin|PF00240.19|5.3e-31,ubiquitin|PF00240.19|7.3e-32,ubiquitin|PF00240.19|8.6e-32,ubiquitin|PF00240.19|64,Rad60-SLD|PF11976.4|2.7e-15,Rad60-SLD|PF11976.4|4e-15,Rad60-SLD|PF11976.4|6.8e-15,Rad60-SLD|PF11976.4|2.2e-15,Rad60-SLD|PF11976.4|1e+02,Ubiquitin_2|PF14560.2|0.0022,Ubiquitin_2|PF14560.2|0.0021,Ubiquitin_2|PF14560.2|0.0015,Ubiquitin_2|PF14560.2|0.00055,Rad60-SLD_2|PF13881.2|0.66,Rad60-SLD_2|PF13881.2|0.57,Rad60-SLD_2|PF13881.2|0.14,Rad60-SLD_2|PF13881.2|0.17,DUF2407|PF10302.5|1.8,DUF2407|PF10302.5|1.3,DUF2407|PF10302.5|0.89,DUF2407|PF10302.5|2.6,DUF2870|PF11069.4|11,DUF2870|PF11069.4|11,DUF2870|PF11069.4|9.6,DUF2870|PF11069.4|9.6,TmoB|PF06234.8|17,TmoB|PF06234.8|8,TmoB|PF06234.8|4.4,TmoB|PF06234.8|8.2,Telomere_Sde2|PF13019.2|4.2,Telomere_Sde2|PF13019.2|7.8,Telomere_Sde2|PF13019.2|8.1,Telomere_Sde2|PF13019.2|7,Methyltrans_RNA|PF04452.10|2.8,Methyltrans_RNA|PF04452.10|1.9,Methyltrans_RNA|PF04452.10|2,Methyltrans_RNA|PF04452.10|1.3e+02 S_Transcript_54624:3-971(-)
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPFDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPFDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKALTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES

Click here to download the sequence:
Link to NCBI Protein BLAST