Transcript Information: S_Transcript_54649.p1


Annotated TAIR IDAT5G15880.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5185788-5187461 | Forward length=348
E-Value2.9E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1768969776484
Replicate 28.778298232433
Replicate 38.6098714873042
Condition 2: 8 Hour
Replicate 111.200072368149
Replicate 211.156253433073
Replicate 312.099711903093
Condition 3: 24 Hour
Replicate 17.7065504091486
Replicate 29.678709983533
Replicate 39.2324724878144


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54649.p1 GENE.S_Transcript_54649~~S_Transcript_54649.p1 ORF type:complete len:377 (+),score=92.96 S_Transcript_54649:93-1133(+)
ATGGCGGGGCTGCTAGCATGGGCAGCAGATGTAGTAGGAGGAGGTGGTGGAAGCGATCAAGGATCCGACGGCCCTGATTCCATCCCTCTCATTCTAACCCCAGAACAACAACTCTACCTCTCTGAATTAAACCACAAAGCGGCTTCTCTGAACCGTTCGATCCAGGATCTACGGCTTAGAATCCCTCCTTCTGACATCTCTCTACGTCTCCCTCACCTTCATGCTCATTCACTCGCTTCCAATGCTGCCCTTGCCCTTCAATTAAATTCCCACTCTGCCACCCGCGAACAGGCACAACAAAGGGAGGCGAAGTTGCTGGAAGAAAATGTCGCCTTTGAAAATGAAATATCAAATTGTCAGGCAAAGATCCAAGAGAAGTCACAGGAGGCAGAACAATTGCAGAGGAGGTTGAAGGAAATGGAACTGGCCGAAGAAAATTTGAGAGCAGAGTTAGAACAGGCTCAAGCTACTTCAAATACCAGCCAGTCTGATAATTCTCTGTCCAAACCCAAGAAAGAAGTTGAAACTGAAGCTAAAGAAGATGCGTCTACATCTGCTATGGTGGAGAAGCTAGAGAACAAGAAGAAAGAACTTCAATTGGTTGAGGAGAGAATTCAAGTTTTGGAGAGGAAGTGGGCAGAGGTTCAAGATAAAGTACTGAAGCAACCTTCTCCAGCTCAGAGAGAGAAAGTATTGGATAAACAGCTTCACAGCTTGATAGAGCAACTAGCTTCAAAACAGGCACAAGCTGAAGCACTTGTGAGCGAAATACATTCAAAGGAGAAGGAGCTTGAGAAATTAAATGGACAATGGAGGAGAGTTGAGAATAGCATCAAGGAAGCCAATGCTGCTAGGAATCGGTTGGGAAGAGATAGCAGCAGATACGACACATCTGATGGCAACCTAGATGGTCACAACAAGCTCCCATATCATACTGGTGGGCGATCTGAATACCGCCAGAGGCTCAGACTTCTAAGGTCATCTTTTGTCCTCTACATCTTTTTGCTGCACTTTATAGTCTTCATTAAGCTTGCGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54649.p1 GENE.S_Transcript_54649~~S_Transcript_54649.p1 ORF type:complete len:377 (+),score=92.96 S_Transcript_54649:93-1133(+)
MAGLLAWAADVVGGGGGSDQGSDGPDSIPLILTPEQQLYLSELNHKAASLNRSIQDLRLRIPPSDISLRLPHLHAHSLASNAALALQLNSHSATREQAQQREAKLLEENVAFENEISNCQAKIQEKSQEAEQLQRRLKEMELAEENLRAELEQAQATSNTSQSDNSLSKPKKEVETEAKEDASTSAMVEKLENKKKELQLVEERIQVLERKWAEVQDKVLKQPSPAQREKVLDKQLHSLIEQLASKQAQAEALVSEIHSKEKELEKLNGQWRRVENSIKEANAARNRLGRDSSRYDTSDGNLDGHNKLPYHTGGRSEYRQRLRLLRSSFVLYIFLLHFIVFIKLAF*

Click here to download the sequence:
Link to NCBI Protein BLAST