Transcript Information: S_Transcript_54724.p1


Annotated TAIR IDAT2G29190.1
Annotated Gene Namepumilio 2
Annotated Gene Symbol(s)APUM2, PUM2
Annotation TypeOrtholog
Chromosome Positionchr2:12544260-12548071 | Reverse length=972
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.603235268109
Replicate 232.322092467769
Replicate 335.223327208564
Condition 2: 8 Hour
Replicate 149.152673367582
Replicate 243.435276601579
Replicate 341.752901876296
Condition 3: 24 Hour
Replicate 134.076342702969
Replicate 228.443844058906
Replicate 331.630329896349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54724.p1 GENE.S_Transcript_54724~~S_Transcript_54724.p1 ORF type:complete len:1043 (+),score=271.38,NABP|PF07990.8|6.1e-138,PUF|PF00806.15|2.7e-06,PUF|PF00806.15|6.5e-07,PUF|PF00806.15|9.2e-06,PUF|PF00806.15|3.8e-06,PUF|PF00806.15|2.2e-07,PUF|PF00806.15|1.8e-06,PUF|PF00806.15|1.6e-05,PUF|PF00806.15|1.9e-06 S_Transcript_54724:685-3813(+)
ATGATATCTGAATTGGGTAGGAGACCAATGATAGGTGGGAATAATAATAACAACAATAATGAGGGAAGTTCTTTTGGGGATGATTTAGAGAAGGAGATAGGGATGTTGCTCCGTGAGCAGAGGCACCACAACCACCCTGGTGGGGCCGATGATCGTGAGCGGGAGCTCAACATATACAGGAGTGGGTCTGCCCCTCCCACTATCGAGGGTTCGTTGAGTGCTGTAGGAGGTTTGTTCGGGAATGACACTGGTGGCGGAGGCGGTGGTGGTTTCTCGGATTTTGCTAGGCTTAGGGATGGCAATGGGGAGATGTCTGAGGACCAGCTAAGGGCTGACCCTACTTATTTATCCTACTATTACACACACGTTAACTTGAACCCTAGGTTGCCCCCACCCTTGATGTCTAAGGAGGATTGGAGGTTTGCTCAAAGGTTACAAGGCGGTGGGAGCTCTGTTTTGGGTGGAATTGGGGATAGGAGGAAAGTGCATAATAAGTCTGAGAATGGCCCTGGTCCTGGTAGGTCTCTCTTTTCGATGCCTCCTGGGTTTAGCTCCAAGAAAGATGAGAGGGAGGTTGACCCCGAGAAAGCCCAGGGGCCGGCTGAATGGGGTAAAGATGGCTTACCTGGCTTGCCTAGTATAGGACTTGGGAGCAAACAGAAGAGTCTGGCTGAGATTTTTCAGAATGACCTGGATCGCTCTAATCCTTCCTCAAGACAACCTTCTCGTCCAGCCAGCCGTAATGCTTTTGATGAAAACGTTGATGCTCTAAGTTCAGCTGAAGCTGAGTTGGCACATTTGCGACGAGAGGGTGCTAATCTTCTGGGTTCTTCTGCTGCCCAGAATGTTGCTCCTTCCGCATCATATTCCTATGCTGCTGCTTTGGGTGGATCCTTATCTAGAAGCACTACCCCTGATCCTCAGCATATAGCTAGGGCTCCAAGTCCTTGCCCTACACCTATAGGCGAAGGAAGAGCAGGAGCATCAAAGAAGAATATTAATAGTCCAAACTCATTCAATGGCATGTCATCTGGAATGGGCGACTCTGCTGATCTGGTAGCTGCATTGTCTGGAATGAAGCTCACTTCAAATGGTAATGCTGATGCTGACAGTCACTTACAATCAAAAATTGAACGAGAGGTTTCTGATCACCGCAACTACCTTTTCAATATGCAAAGTGGTCAGGAGCATGGCAAGCAGCAATCATATATGAAAAAGTCTGAATCCGGTCATTTGCACATGCCTTCTGCCCATCAGTCAGCATCTAGGGCCAATATAGGTGGGTCTGACCTTAGGAGTCCCCAAGTTGAGCGTCCAAAACCTGGTGCTAATTCTGGTGGTTTGTATTCTAAGGGATCGTCTCTGTCCTCTATAAATGGTGGTGGTATATCGCCCCATTATACCCCTTTAGATGGAACTGGGTCATCATTCGGAAATTATGGTTTGACTGGGTTTTCCTTGAACTCAAACGTGCCGTCTATGATGGCAAGCCAACTCGGTAACTTCAATCTGCCTCCATTACTAGAAAATGTTGCTGCTGCTTCAGCTATGGGAGTTCCCGGATTGGATTCGAGAGTTCTTGCTGGTGGTTTACCTGCTGGACAGAATTTGACTGGAGCACCAGAATCTGGTCGGATGGGCAATCATATGGCAGCAAATGCTCTGCAGGCGTCTCTTGCAGATGCTATGTATCATCAATACCTGAGATCAGCCGAATATGCTGCCCATGCTGCTGCTCTAGGTGATCAGTCTCAAGATAAGTATTATATGGAGTTGCTTCAGAAAGCATATTTAGGTTCTGTGATGTCACCTCAGAAGTCGCAATATGGCGCTCCTTTGGGCAATAAATCTAGTGGTTCTAATCATGGTTACTATGGAAATCATGCATTTGGGTTTGGCATGGGATATCCTGGAAGCCCATTGACAAGTCCTGTTATCCCAACCTCACCTGTTGGGCCAGGCAGTCCTATCAGGCACAATGAGTTTAACATGCGTTTTCCTAGTACAATGAGGAACTTAGGTGGTGGTGTCATGGGACCTTGGCACATGGATGGAGGCTTTGGATCTTCTCTGTTGGAGGAGTTCAAGAGCAATAAGACCAAGTGTTTTGAGCTTTCAGAAATAGCAGGCCATGTTGTTGAGTTCAGTGCCGATCAGTATGGAAGTCGTTTTATTCAGCAAAAACTTGAAACTGCTACAACAGAGGAGAAAAACATGGTCTTTGAGGAAATCATCCCTCAAGCTCTTTCGCTGATGACTGATGTGTTTGGAAACTATGTGATTCAGAAGTTTTTTGAGCATGGAATGGATTCTCAAAGAAGAGAGCTCGCTAGCAAGCTTGATGGTCATGTGTTGAACCTCAGCCTGCAAATGTATGGCTGTCGTGTTATCCAAAAGGCTATTGAAGTTGTTGATCTGGATCAAAAGATTAAGATGGTTCAAGAGCTTGATGGCCATATAATGCGATGTGTACGTGATCAGAATGGGAACCATGTAATCCAGAAGTGCATTGAATGTGTACCCGAAGAGCATATTCAATTTATAGTGGAATCATTTTTCGATCAAGTTGCTACACTGTCAACCCATCCATATGGCTGTCGCGTGATTCAGAGGGTTCTGGAGCATTGCGAAGATGCACAGACTCAAAGCAAAGTCATGGATGAAATTCTGGGTTCAGTTAGCATGTTGGCGCAAGATCAATATGGCAATTATGTGGTTCAGCATGTGCTGGAACATGGAAAACCACATGAACTTACAGCTATTATCAAAGAATTAGCTGGGAAAATAGTCCAAATGAGTCAGCAGAAGTTTGCCTCCAATGTGGTGGAGAAATGTCTTACTTTTGGCAATACAGAAGAACGAGAGCTTATGGTGAATGAGATGCTTGGTACTACAGATGAGAATGAGCCTCTTCAGGCTATGATGAAAGACCAATTTGCAAACTATGTTGTACAGAAGGTGTTGGAAACCTGCAGTGATCAGCAAAGGGAGCATATCCTAGCTCGAATCAAGGTTCATTTAAATGCATTGAAAAAATACACTTATGGGAAGCATATTGTTGCACGTGTAGAGAAGCTTGTTGCTGCAGGAGAAAGGAGAATTGCTGGACAGTCTCCTCAACCTGCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54724.p1 GENE.S_Transcript_54724~~S_Transcript_54724.p1 ORF type:complete len:1043 (+),score=271.38,NABP|PF07990.8|6.1e-138,PUF|PF00806.15|2.7e-06,PUF|PF00806.15|6.5e-07,PUF|PF00806.15|9.2e-06,PUF|PF00806.15|3.8e-06,PUF|PF00806.15|2.2e-07,PUF|PF00806.15|1.8e-06,PUF|PF00806.15|1.6e-05,PUF|PF00806.15|1.9e-06 S_Transcript_54724:685-3813(+)
MISELGRRPMIGGNNNNNNNEGSSFGDDLEKEIGMLLREQRHHNHPGGADDRERELNIYRSGSAPPTIEGSLSAVGGLFGNDTGGGGGGGFSDFARLRDGNGEMSEDQLRADPTYLSYYYTHVNLNPRLPPPLMSKEDWRFAQRLQGGGSSVLGGIGDRRKVHNKSENGPGPGRSLFSMPPGFSSKKDEREVDPEKAQGPAEWGKDGLPGLPSIGLGSKQKSLAEIFQNDLDRSNPSSRQPSRPASRNAFDENVDALSSAEAELAHLRREGANLLGSSAAQNVAPSASYSYAAALGGSLSRSTTPDPQHIARAPSPCPTPIGEGRAGASKKNINSPNSFNGMSSGMGDSADLVAALSGMKLTSNGNADADSHLQSKIEREVSDHRNYLFNMQSGQEHGKQQSYMKKSESGHLHMPSAHQSASRANIGGSDLRSPQVERPKPGANSGGLYSKGSSLSSINGGGISPHYTPLDGTGSSFGNYGLTGFSLNSNVPSMMASQLGNFNLPPLLENVAAASAMGVPGLDSRVLAGGLPAGQNLTGAPESGRMGNHMAANALQASLADAMYHQYLRSAEYAAHAAALGDQSQDKYYMELLQKAYLGSVMSPQKSQYGAPLGNKSSGSNHGYYGNHAFGFGMGYPGSPLTSPVIPTSPVGPGSPIRHNEFNMRFPSTMRNLGGGVMGPWHMDGGFGSSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFEEIIPQALSLMTDVFGNYVIQKFFEHGMDSQRRELASKLDGHVLNLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGHIMRCVRDQNGNHVIQKCIECVPEEHIQFIVESFFDQVATLSTHPYGCRVIQRVLEHCEDAQTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHELTAIIKELAGKIVQMSQQKFASNVVEKCLTFGNTEERELMVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCSDQQREHILARIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAGQSPQPA*

Click here to download the sequence:
Link to NCBI Protein BLAST