Transcript Information: S_Transcript_54767.p1


Annotated TAIR IDAT5G24120.1
Annotated Gene Namesigma factor E
Annotated Gene Symbol(s)SIGE, SIG5, ATSIG5
Annotation TypeOrtholog
Chromosome Positionchr5:8157794-8159746 | Reverse length=517
E-Value1.3E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 188.145952067968
Replicate 2104.74511265841
Replicate 3109.91017862539
Condition 2: 8 Hour
Replicate 113.107513508989
Replicate 29.6125669492467
Replicate 310.267749328026
Condition 3: 24 Hour
Replicate 1134.52070835441
Replicate 2107.94786554283
Replicate 3118.72341903988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54767.p1 GENE.S_Transcript_54767~~S_Transcript_54767.p1 ORF type:complete len:519 (+),score=113.68,Sigma70_r3|PF04539.12|8.4e+02,Sigma70_r3|PF04539.12|1.5e-07,Sigma70_r3|PF04539.12|3.5e-12,Sigma70_r3|PF04539.12|3.3e+02,Sigma70_r4|PF04545.12|12,Sigma70_r4|PF04545.12|3.8e+02,Sigma70_r4|PF04545.12|1.1e-12,Sigma70_r2|PF04542.10|2.3e-11 S_Transcript_54767:337-1893(+)
ATGGGAGTTGTGACTATTTCCAGCTCAGCTTCTCGGGCATCATTGGGATTAAGCAAGAGAATCACAGCTCATCAATCTACTTTAAACAAGCCTTTGATTTTAAGCTTCAAAACAGATAAAAAGAAAAGTAGAGCCTTAGTTGCAACTAGTGAGCCTATCCGCTTGGGTTTGCAGACAAAGAAGGATAATCAGAAGAAACTGAGATCATCTACTAAGCCTTCAAAAGGAAAACGAGCTGCTACCAGAACTGAAGTTTCCCCATATGCGGCTGAACAGGAACTGGATTTCAATGAAGCAGCAGCCAAGCTTGAAAGTATCTTTAAGCTTAGTCCTGCAACAGATGCTTCTGATACGGATAACTTTGATAATGTAGTAACAAAAAGCCGAAGAAGGAGAAAGACAAGTACTGAAGTTGATGAGAAAAAAGAGAAAGCAAGTACTGCTAATGTGGTGAGAAACAGAACGAGGAAGGCGAAACGGTTGAGCCTCGATAAGAGAATTGAAATGAAAAAAAATAAGGAAAAGAAAGTGGTTCCTCTGACACTAAAGAAGAAAGCAGGTAACAATGGAGATGAAAAGATAGAGGAGCTTGTAAGGGAGTATTCTGCCTCGACTGATTTGGTCAGCTTGGATTGGAAGAAGATGAAGATTCCTCCAGTTCTTCCATCTTCTGAGCATGCTTGGTTGTTCAAATTGATGGAGCCAACAAAGGCCCTACAGCAAGTGAAAGAGAACCTACAGAGAGAACTGGGGAGAGATCCTACAGACTCTGAATTAGGAGAGGCAATGAATATGACAGTAGTTCAAGTTAGAAGGCGCTTGGAGATTGGTCATGCTGCAAGAAACAAATTGATTAAGCACAACCTGAGATTGATACTGTTTGTGATGAACAAATATTTCCAAGACTTCACAAATGGGCCAAAATTTCAAGACTTGTGTCAAGCAGGAGTTAAGGGTTTGATTACTGCCATAGATCGCTTTGAACCAAGGAGGAAGTTTCGGCTGTCCACGTATGCTCTATTTTGGATCAGGCATGCCATTATCCGTTCAATGACCGTGTCAAGCTTTACTCGTGTCTCCTTTGGTCTGGAATCGGTGAGGGTGGAAATCCAGAAAGCCAAATTAGAACTGATGTTTGAGCTTAAGAGGATGCCAACAGAAGAAGAAATAATGGAAAGGGTAGGAATTTCCCCTGAAAGATATCAAGAAGTGATGAGAGCTGCAAATCCCATCTATTCCCTACATTCTAGACATATAGTCACACAAGAAGAGTTCATTGATGGCATTACTGACGTTGATGGTGTTGGGGGCGACAAAAGAAGGCAACCGGCCCTTCTAAGGCTTGCCCTTGATGATGTGCTTGACTCTTTGAAACCCAAGGAGAGCTTGGTCATCAGGCAAAGATATGGACTAGATGGTAAAGGAGATAGAACGTTGGGAGAAATCGCAGGAAACCTTAATATTTCGAGAGAAATGGTCAGGAAGCACGAAATGAAAGCTCTATTGAAGCTTAAACATCCAACTCGAATGGATTATCTTCGTCGTTATGTACACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54767.p1 GENE.S_Transcript_54767~~S_Transcript_54767.p1 ORF type:complete len:519 (+),score=113.68,Sigma70_r3|PF04539.12|8.4e+02,Sigma70_r3|PF04539.12|1.5e-07,Sigma70_r3|PF04539.12|3.5e-12,Sigma70_r3|PF04539.12|3.3e+02,Sigma70_r4|PF04545.12|12,Sigma70_r4|PF04545.12|3.8e+02,Sigma70_r4|PF04545.12|1.1e-12,Sigma70_r2|PF04542.10|2.3e-11 S_Transcript_54767:337-1893(+)
MGVVTISSSASRASLGLSKRITAHQSTLNKPLILSFKTDKKKSRALVATSEPIRLGLQTKKDNQKKLRSSTKPSKGKRAATRTEVSPYAAEQELDFNEAAAKLESIFKLSPATDASDTDNFDNVVTKSRRRRKTSTEVDEKKEKASTANVVRNRTRKAKRLSLDKRIEMKKNKEKKVVPLTLKKKAGNNGDEKIEELVREYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMEPTKALQQVKENLQRELGRDPTDSELGEAMNMTVVQVRRRLEIGHAARNKLIKHNLRLILFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYALFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLELMFELKRMPTEEEIMERVGISPERYQEVMRAANPIYSLHSRHIVTQEEFIDGITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEMKALLKLKHPTRMDYLRRYVH*

Click here to download the sequence:
Link to NCBI Protein BLAST