Transcript Information: S_Transcript_54786.p1


Annotated TAIR IDAT1G05500.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, SYT5
Annotation TypeOrtholog
Chromosome Positionchr1:1625098-1628940 | Forward length=560
E-Value1.7e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.196522045963
Replicate 221.322165879789
Replicate 320.723639839523
Condition 2: 8 Hour
Replicate 120.23274664364
Replicate 222.688058514493
Replicate 326.663639760295
Condition 3: 24 Hour
Replicate 115.669651408447
Replicate 217.538426626219
Replicate 317.91389019586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54786.p1 GENE.S_Transcript_54786~~S_Transcript_54786.p1 ORF type:complete len:566 (+),score=105.46,C2|PF00168.26|2.9e-22,C2|PF00168.26|3.6e-25,SMP_LBD|PF17047.1|1e-15 S_Transcript_54786:336-2033(+)
ATGTCCTTCTTTCTGGGTTTGGTGATTGGGATAGTAGCAGGGTTTTCACTGATAGTTCTCTTTGTTCGCTGTGAAAATGCTCGATCCAAACGCCGCTCTCAACTTGCAGCTACAATTGCAGCATTTGCAAGGATGACAGTGGAAGATTCTAGAAAGTTGTTACCCCCACCTTACTACCCTTCTTGGGTTGTCTTCTCTCAACGCCAAAAGTTGAATTGGCTCAATACCCATCTAGTCAAAATTTGGCCTTATGTTGACCAGGCTGCTTCTGAGCTAATAAGGGCTTCAGTGGAACCAGTATTAGAGCAATATAGACCGATTATTTTGTCAGCCTTGAAATTTTCCAAGTTCACTCTTGGTACTGTTGCTCCTCAATTTACAGGGGTTGCAATCATTGATGACAATGAAGATGGTATTACCATGGAACTGGAAATGAATTGGGACGGAAATCCCAGCATTATCCTTGATATCAAGACTAGGCTTGGTGTCTCCCTACCTGTACAGGTAAAGGATATTGGGTTCACTGGTATTTTCAGGTTGATATTTAAGCCTCTAGTTCCAGAGTTTCCAGGCTTTGGAGCTGTAAGCTACTCATTGAGAAAAAAGAAAAAGTTGAATTTTACTCTTAAAGTTGTTGGTGGAGACATATCTGCAATCCCAGGGCTTTCTGATGCGATCGAGAGTACTATAAGGGATGCCATTGAGGATTCTATCATGTGGCCAGTTCGTAAAATTATTCCCATTTTGCCGGGTGACTATAGTGACTTAGAGCTAAAGCCTGAGGGAATACTAGAGGTGAAGCTTGTGCAAGCTAAAGAGTTGACAGATAAGGATCTGATTGGGAAATCAGATCCCTTTGCGGTGTTATATGTACGCCCTACACGTGATAGGATGAAGACCAGTAAGACAATTAATAACCAGCTGAACCCTATCTGGAACGAGCACTTTGAATTTATAGTTGAGGATAAATCTACCCAAAACTTGGTTGTAAAAATCTATGATGACGAGGGCCTTCAAGCAGCTGAATTCATAGGTTGTGCACAATTCCATCTGAAGGACCTTGAGCCCGGTAAAGTGAAGGATGTATGGCTCAAACTTGTCAAAGATTTGGAGGTTCAGAGAGATACGAAGAACAGGGGGCAGGTACATTTGGAGCTTTTATATTGTCCTTTCGGTGCAAGTGGTGTTAAAAATCCTTTTGCGTCTTCAGTTTCCATGACTTCACTGGAGAAGGTTCTTAAAACTGGAGTAGATGATACTGAAACTTTTGAAAATGGAACCAACCTTGTTCCTAAGAGGAAGGAGGTTATTGTCAGAGGGGTGCTGTCTGTTACAGTTATTTCTGGTGATGACCTACCTGCAGCAGATCTATTCGGAAAGTCAGACCCATATGTTACACTCACTATGAAGAAATCTGGAACAAGAAACAAAACTAGGGTTGTGAATGAAAGCTTAAATCCAGTTTGGAACCAGACATTTGACTTCCTTGTCGAGGATGGGCTACATGATATGCTAATCTTGGAAGTATGGGATCATGACACCTTCGGGAAGGATTATATGGGTAGATGCATCATGACATTGACAAGAGTTATATTAGAGGGAGAATATGAAGACAGTTTTCCACTAGATGGAGCTAAGACCGGTGCCCTGAATTTGTCTCTGAAGTGGAGTCCTCAACCTGTGTATCGTGACTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54786.p1 GENE.S_Transcript_54786~~S_Transcript_54786.p1 ORF type:complete len:566 (+),score=105.46,C2|PF00168.26|2.9e-22,C2|PF00168.26|3.6e-25,SMP_LBD|PF17047.1|1e-15 S_Transcript_54786:336-2033(+)
MSFFLGLVIGIVAGFSLIVLFVRCENARSKRRSQLAATIAAFARMTVEDSRKLLPPPYYPSWVVFSQRQKLNWLNTHLVKIWPYVDQAASELIRASVEPVLEQYRPIILSALKFSKFTLGTVAPQFTGVAIIDDNEDGITMELEMNWDGNPSIILDIKTRLGVSLPVQVKDIGFTGIFRLIFKPLVPEFPGFGAVSYSLRKKKKLNFTLKVVGGDISAIPGLSDAIESTIRDAIEDSIMWPVRKIIPILPGDYSDLELKPEGILEVKLVQAKELTDKDLIGKSDPFAVLYVRPTRDRMKTSKTINNQLNPIWNEHFEFIVEDKSTQNLVVKIYDDEGLQAAEFIGCAQFHLKDLEPGKVKDVWLKLVKDLEVQRDTKNRGQVHLELLYCPFGASGVKNPFASSVSMTSLEKVLKTGVDDTETFENGTNLVPKRKEVIVRGVLSVTVISGDDLPAADLFGKSDPYVTLTMKKSGTRNKTRVVNESLNPVWNQTFDFLVEDGLHDMLILEVWDHDTFGKDYMGRCIMTLTRVILEGEYEDSFPLDGAKTGALNLSLKWSPQPVYRDS*

Click here to download the sequence:
Link to NCBI Protein BLAST