Transcript Information: S_Transcript_54800.p1


Annotated TAIR IDAT4G00980.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:422732-424580 | Reverse length=488
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53763638858951
Replicate 21.5599952212384
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 11.0770399150067
Replicate 23.05070663269
Replicate 31.8301485317408
Condition 3: 24 Hour
Replicate 10.33098308319082
Replicate 21.3735643379605
Replicate 31.273840626521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54800.p1 GENE.S_Transcript_54800~~S_Transcript_54800.p1 ORF type:3prime_partial len:198 (+),score=50.07,UBN2_2|PF14227.2|1.2e-12,UBN2_2|PF14227.2|7.2e+03,UBN2|PF14223.2|2.7e-06 S_Transcript_54800:1315-1905(+)
ATGGTTGATGAGAAACCAATTATGGATCAAGTTCATGAGTATGAGAATCTGGTTGCTGAGGTTTTGAGTGAGGGTATGAAAATGTGTGAGACCCTACAAGCTAATGTGTTACTTGAGAAATTCCCACCCTCTTGGAGTGATTATAGGAACCAACTCAAACACAAAAAGAAAGATCTCACCTTGCAAGAGTTAATTAGTCACATGAGAACCGAGGAAGCCAATCGCCTTAAGGACAAACAAGTTTCTTCTATTATTGCTCCTATGGCTAATCTTGTTGAGTCTTCAGGTACTAACAATGACAGGTTCAAGGGAAAGAACAAGAAATACCAAAAGAAAGACAACAAGAAAGGCCACTTTCATAAAAGGATTGATGGGCATATCCAAAAGAAGAAAATTCAATGTTTTGTTTGTGGTGGTCCATATAAGGCGGCACAGTGCTTCAAGCGGAAGGGACAACCAAGCAACAACAACAACCAAAACCCTCCGGCTCAAGCCAATCTTGCCGAGAAAGAGGAGATCATTGCTGCGTTAGTTGAATCCAACTTGGTTGAGGATAAGAGGGCTTGGATCCTTGATACTGGAGCTTCGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54800.p1 GENE.S_Transcript_54800~~S_Transcript_54800.p1 ORF type:3prime_partial len:198 (+),score=50.07,UBN2_2|PF14227.2|1.2e-12,UBN2_2|PF14227.2|7.2e+03,UBN2|PF14223.2|2.7e-06 S_Transcript_54800:1315-1905(+)
MVDEKPIMDQVHEYENLVAEVLSEGMKMCETLQANVLLEKFPPSWSDYRNQLKHKKKDLTLQELISHMRTEEANRLKDKQVSSIIAPMANLVESSGTNNDRFKGKNKKYQKKDNKKGHFHKRIDGHIQKKKIQCFVCGGPYKAAQCFKRKGQPSNNNNQNPPAQANLAEKEEIIAALVESNLVEDKRAWILDTGASR

Click here to download the sequence:
Link to NCBI Protein BLAST