Transcript Information: S_Transcript_54802.p1


Annotated TAIR IDAT4G00980.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:422732-424580 | Reverse length=488
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.691234097779
Replicate 218.649488034043
Replicate 320.510307393421
Condition 2: 8 Hour
Replicate 126.298127072698
Replicate 232.554551047495
Replicate 324.422417323196
Condition 3: 24 Hour
Replicate 129.240796959383
Replicate 231.404115592338
Replicate 326.80549113907


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54802.p1 GENE.S_Transcript_54802~~S_Transcript_54802.p1 ORF type:complete len:446 (+),score=75.20,gag_pre-integrs|PF13976.2|4.5e-12,UBN2_2|PF14227.2|5.6e-12,UBN2|PF14223.2|1.2e-05 S_Transcript_54802:1315-2652(+)
ATGGTTGATGAGAAACCAATTATGGATCAAGTTCATGAGTATGAGAATCTGGTTGCTGAGGTTTTGAGTGAGGGTATGAAAATGTGTGAGACCCTACAAGCTAATGTGTTACTTGAGAAATTCCCACCCTCTTGGAGTGATTATAGGAACCAACTCAAACACAAAAAGAAAGATCTCACCTTGCAAGAGTTAATTAGTCACATGAGAACCGAGGAAGCCAATCGCCTTAAGGACAAACAAGTTTCTTCTATTATTGCTCCTATGGCTAATCTTGTTGAGTCTTCAGGTACTAACAATGACAGGTTCAAGGGAAAGAACAAGAAATACCAAAAGAAAGACAACGAGAAAGGCCATTTTCATAAAAGAACCGATGGGCATGTCCAAAAGAAGAAGATTCAATGTTTTGTATGTGGTGGTCCACACAAGGCGGCTCAATGCTTCAAGCGCAAGGGGCAACCGAGTAACAACAACAACAACTCTCCTGCACAAGCCAATCTTGCCGAGAAAGAGGAAATCATTGTTGCGGTGATTGAAGCCAACTTGGTTGAGGACAAGAAGGCTTGGATCCTGCACACAGGAGCATCAAGGCATTTCTGCGCCAACAAGGAGTTGTTCCATGAGTTCGAGGAGATAGCAGATGGAGAGCATGTTTTCATGGGGAACTCCGCAACTGCAGGTGTGCTCGGCAAAGGGAAGGTTTTGCTTAAGTTAACCTCTGGCAAAACCTTAGCTTTGCAAGATGTGCTGTATGTCCCTTCCCTACGAAGGAACTTAGTTTCTGGTAGTTTACTTAATCGTGCGGGTCAGAAAATTGTTTTTGAATCTGATAAGGCCGTAATTACCAGGAATGAAGATTTTGTAGGAAAGGGATACTTGGCCGATGGCCTCTTTGTATTGAACACTGTTATTCCTATTATTAATGAAAGTTCTTCCGCATCTGCTTATATTGCTGAGTCGTTTGATGTGTGGCATGGTAGGCTTGGTCATTTAAATTTAGATTCAATTAAAAAACTTGGTAAAATAAGTTTGATAAATGTTGTTAGTAAGGACAACGATTTTTCAAAATGTGATGTGTGTGTTGAAGCTAAATATTCGAAAAAGCCTATTAAGCCAGTGACTAAGAGAAGTACTCAATTACTTGAATTGGTATATACTGACTTATCGGATTTTAAGAACACGGTTAGCAAAGGTGGTAAAAAGTACTATATCTCTTTTGTGGATGATTATTCGAGATATACAAAAATTTACTTTTTAAAATCCAAAGATGAGGCTGAAACCATGTTCTTAAAATACAAAGCTGAAGTAGAGAACCAGTTAGATAGGAAGATAAAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54802.p1 GENE.S_Transcript_54802~~S_Transcript_54802.p1 ORF type:complete len:446 (+),score=75.20,gag_pre-integrs|PF13976.2|4.5e-12,UBN2_2|PF14227.2|5.6e-12,UBN2|PF14223.2|1.2e-05 S_Transcript_54802:1315-2652(+)
MVDEKPIMDQVHEYENLVAEVLSEGMKMCETLQANVLLEKFPPSWSDYRNQLKHKKKDLTLQELISHMRTEEANRLKDKQVSSIIAPMANLVESSGTNNDRFKGKNKKYQKKDNEKGHFHKRTDGHVQKKKIQCFVCGGPHKAAQCFKRKGQPSNNNNNSPAQANLAEKEEIIVAVIEANLVEDKKAWILHTGASRHFCANKELFHEFEEIADGEHVFMGNSATAGVLGKGKVLLKLTSGKTLALQDVLYVPSLRRNLVSGSLLNRAGQKIVFESDKAVITRNEDFVGKGYLADGLFVLNTVIPIINESSSASAYIAESFDVWHGRLGHLNLDSIKKLGKISLINVVSKDNDFSKCDVCVEAKYSKKPIKPVTKRSTQLLELVYTDLSDFKNTVSKGGKKYYISFVDDYSRYTKIYFLKSKDEAETMFLKYKAEVENQLDRKIKR*

Click here to download the sequence:
Link to NCBI Protein BLAST