Transcript Information: S_Transcript_54830.p1


Annotated TAIR IDAT5G43010.1
Annotated Gene Nameregulatory particle triple-A ATPase 4A
Annotated Gene Symbol(s)RPT4A
Annotation TypeOrtholog
Chromosome Positionchr5:17248563-17251014 | Reverse length=399
E-Value9.9E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.488014546154
Replicate 292.982828808479
Replicate 392.25967227856
Condition 2: 8 Hour
Replicate 187.375601723315
Replicate 288.427381780465
Replicate 390.206966049011
Condition 3: 24 Hour
Replicate 185.854205439343
Replicate 288.168444037661
Replicate 382.58489851351


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54830.p1 GENE.S_Transcript_54830~~S_Transcript_54830.p1 ORF type:5prime_partial len:401 (+),score=94.96,AAA|PF00004.25|4.1e-42,AAA_16|PF13191.2|0.00017,AAA_16|PF13191.2|44,AAA_5|PF07728.10|4.1e+02,AAA_5|PF07728.10|0.00011,AAA_2|PF07724.10|1.7e+03,AAA_2|PF07724.10|1.6e-05,RuvB_N|PF05496.8|7.2e-06 S_Transcript_54830:3-1205(+)
GTGAGTTCAATGGCGACGGAAGAGGATGTACGACGTCGTACGGCGATAGCCGACTATCGCAAGAAGCTACTTCAGCATCGCGAACTCGAATCCAGAAATCGCAAAGTGAAGGAGGAACTGCGAGCTGCTAAAAAAGAGTTTGGTAAGACAGAGGACGACTTGAAGTCCCTGCAGAGCGTTGGACAGATCATAGGGGAGGTTCTCAGGCCTCTTGACAATGAAAGATTGATTGTGAAAGCTAGCAGTGGACCGAGATATGTGGTCGGTTGCAGGAACAAAGTTGACAAGGAAAAGCTAACTTCTGGCACTCGTGTTGTTCTTGATATGACTACCCTTACAATCATGCGTGCACTTCCACGAGAAGTTGATCCAGTTGTATACAATATGCTTCATGAGGATCCTGGAAATGTTAGTTATTCCGCTGTTGGAGGGCTATCAGATCAGATCCGCGAGCTCAGGGAATCAATAGAGCTTCCACTAATGAATCCTGAGCTTTTTCTCAGGGTGGGAATTAAACCCCCAAAGGGTGTTCTTCTGTATGGGCCTCCTGGGACGGGCAAGACTTTGTTAGCTCGAGCTATTGCTAGCAACATAGATGCCAATTTCCTGAAGGTTGTGTCTAGTGCCATCATAGATAAATACATTGGTGAAAGTGCAAGATTGATCCGTGAAATGTTTGGTTATGCTCGTGATCACCAGCCATGTATCATCTTCATGGATGAGATTGATGCCATTGGAGGTCGTCGATTCAGTGAAGGGACTAGTGCTGACCGTGAAATTCAAAGAACTCTCATGGAGTTGCTGAATCAGTTGGATGGATTTGACCAACTTGGAAAGGTGAAAATGATTATGGCAACCAATAGACCAGATGTGTTGGACCCTGCACTTCTCCGTCCAGGGCGTTTGGATAGGAAGATTGAGATTCCATTGCCAAATGAACAGTCAAGGATGGAAATCCTTAAAATTCATGCTGCCGGCATTGCAAAACACGGTGAGATTGACTACGAAGCAATTGTTAAGCTAGCAGAGGGATTTAATGGGGCTGATCTACGGAACATTTGTACTGAGGCTGGGATGTCAGCTATCCGTGCAGAGCGTGACTATGTTATTCATGAAGACTTTATGAAGGCTGTACGGAAGTTGAGTGAAGCTAAAAAATTGGAATCAAGCGCTCATTATAGCGCTGATTTTGGCAAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54830.p1 GENE.S_Transcript_54830~~S_Transcript_54830.p1 ORF type:5prime_partial len:401 (+),score=94.96,AAA|PF00004.25|4.1e-42,AAA_16|PF13191.2|0.00017,AAA_16|PF13191.2|44,AAA_5|PF07728.10|4.1e+02,AAA_5|PF07728.10|0.00011,AAA_2|PF07724.10|1.7e+03,AAA_2|PF07724.10|1.6e-05,RuvB_N|PF05496.8|7.2e-06 S_Transcript_54830:3-1205(+)
VSSMATEEDVRRRTAIADYRKKLLQHRELESRNRKVKEELRAAKKEFGKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMSAIRAERDYVIHEDFMKAVRKLSEAKKLESSAHYSADFGKE*

Click here to download the sequence:
Link to NCBI Protein BLAST