Transcript Information: S_Transcript_54877.p1


Annotated TAIR IDAT4G38490.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18006385-18007203 | Forward length=153
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.306460107049
Replicate 21.9121084283179
Replicate 30.98361259112536
Condition 2: 8 Hour
Replicate 10.99518488146621
Replicate 21.3423109183836
Replicate 30.42631695209963
Condition 3: 24 Hour
Replicate 13.4951813584951
Replicate 22.568565311986
Replicate 31.513322664307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54877.p1 GENE.S_Transcript_54877~~S_Transcript_54877.p1 ORF type:5prime_partial len:150 (+),score=23.59,SecE|PF00584.16|2.2e-06 S_Transcript_54877:3-452(+)
TCTGAATTTAGTCAAAGGGTTCGCCGGAAAACTCCAATTCTAACAAAAAAAAGCTGTGTGAAAAAGTGGCTGCTTTTCCATCCCTGCTGTCGAATTCTCCAGATGCCGAGGTTAAAGATTCATGACTCCCTTCACATGAAGCATGTCCGACCCAGATGTGCGGTGTCTAGGGGAGGGAATTATGGTGTTTCAAACTTGGATGATGAGTATCGAGAGGATCCGCTTTGGTTGGAGTTGTCGAGGGAAACATTCAGGGCTTTGAAATTGTTGTTTACTTTCCTTGCTGAGCAGCCTGGCCAGTTGAAATACCTTGAGTGGCCAAGCTTCCAGGACACGCTGCGGACAGCCACTCTCACTCTTGTACTTGTAGCAGTGCTTATTGTTGCATTATCCTCAATCGATTCTGCTCTTTCCTATGTGTTGGCATTACTTCTCCGAAAACCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54877.p1 GENE.S_Transcript_54877~~S_Transcript_54877.p1 ORF type:5prime_partial len:150 (+),score=23.59,SecE|PF00584.16|2.2e-06 S_Transcript_54877:3-452(+)
SEFSQRVRRKTPILTKKSCVKKWLLFHPCCRILQMPRLKIHDSLHMKHVRPRCAVSRGGNYGVSNLDDEYREDPLWLELSRETFRALKLLFTFLAEQPGQLKYLEWPSFQDTLRTATLTLVLVAVLIVALSSIDSALSYVLALLLRKPA*

Click here to download the sequence:
Link to NCBI Protein BLAST