Transcript Information: S_Transcript_54882.p1


Annotated TAIR IDAT2G38780.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16210864-16214110 | Forward length=465
E-Value2.2E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.689083498442
Replicate 216.994310875383
Replicate 314.766650175045
Condition 2: 8 Hour
Replicate 119.416191521849
Replicate 220.028850978134
Replicate 317.35513267838
Condition 3: 24 Hour
Replicate 120.737879259652
Replicate 220.25195324981
Replicate 324.497762724564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54882.p1 GENE.S_Transcript_54882~~S_Transcript_54882.p1 ORF type:complete len:592 (+),score=172.96 S_Transcript_54882:114-1778(+)
ATGGCTTCCCTAAGCCAATCTTCATGGCTTTCTCCCCTTCACACAACCAAGACCATAAACTTGAACAACAAAACCCAACCTTTTTTCTCTACAAACATCAAACCCTCCTCATTCAAGACCTTCAAAATCTCTTCTTTTGCTGTCAACAACACCAAGAATGAATCTTCACTACCCAATTCATCAGATGATCAAGAAACTCTGGAAGAACCAAAACCAGACAGACTTAAACTTGCATTTGAGAAAGCTAAAGAGTACAAGAGATCATCTCAGTTGGAAGGCAGTCAAGAAAGCAGTAAAAACCCAGTTCGTGTTACTGAAGATGTTGAAATGGCAATTGAGAAGGTTCCAGGTGAAGAAAAGGGTGAAAAAGAGGATACTCTTGAAGCTGTTAGAATAGCAATGGAAGAGGCCAGAGAGTATCAAAAGAACAAAGGATGTGTGGGCAGTGTCAGCACCAATGTGGAAAGTGAAGTTGTACCAGAGGGTCAAGATGGTGGAAAGGAGGAGGTTCCTGAAGCTATTAGGATTGCCATGGAGAAAGCAAAAGAGTATAAGAAGAACCAAGGAAAGGTGGATGACAATATAGCTAATGAGGAGGTAACTGGAAAAGAGGAGGTTCCGGAAGCTGTCAGAATGGCAATGGAGAATGCCAAAGAGTATAAGAAGAACAAGGGAAACATAGATGACAAGAGTAGCAGCGTCGAGAGTTTGAAACTGACAGGAGGGAGTAATAGTAGTTTGGGGATTGAAGATATGGAGAGGAATACTGGGAAAAAGGACGAGCTAAAGATTTCCAGCATTGACTTTGTTGGCCTCGGTTTTGCTGAAAAGAAGAGCAGGGGATTGCCAGCTGGGCTGGTCCCAGTTTCAGATCCTTTACCAGAAGGTGACTTGCCTGAGGTAGAAATTCTTGTGGGTGATGCTAGCAAGTTTGAGAATACAACACCCACAGAAGCTAAAACATCAACGGAGGAAGAAAAAGAGGATCTGTACAAGCCAAAGGTGTCTACATGGGGCATGTTTCCTAGACCGAGCAACATCTCAAAAACGTATGGTGGTGGAAAGACTATTCGCCCTGGACAGTCCCTTGAAACTCCTGAAGACAGAGCTGCTAAAGAAGCTCGCACCAGGCAGTTACTTGCTGCTTACAAGAAAAAGATTGGGTTGAACATGGATCCCAAGCTAAAAGCAGAGTGTGAGAAGGCACTGGATGATGGTGACTCATTGATGGATGTGGGAAGGCTGAAGGAGGCATTACCCTATTATCAAAAAGTTATGGACAAGCTGGCTTTCCAGACAGAGCTTCATGGTAGGGCTGCTTTACAATGGTCGATTTGTCAAGATTCACTTAGCCGGCCCGAAAAAGCTCGAGATATGTATGAAAAACTTCAATCGCACCCCAATGCTCAAGTGAACAAAAAGGCCAGACAATTCATGTTTAGCTTTCAGGCAATGGAGATGATGAAAGTTAGTCAATCAAGAGGTTCTGCCAGAAACACAGGTTATCAGAAATATTTTGAAGCATTTGTTGAGGATAAAGAAAATTACACACCAGGAGGGACTGAAGCGGAGGAAGGTGCTCTTAATCAAGCTATTCCATATATTATTTTCCTTGCTTCCCCCATTTTACTTGTGCTGTTTGTTGCAGCAAATAAGGGAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54882.p1 GENE.S_Transcript_54882~~S_Transcript_54882.p1 ORF type:complete len:592 (+),score=172.96 S_Transcript_54882:114-1778(+)
MASLSQSSWLSPLHTTKTINLNNKTQPFFSTNIKPSSFKTFKISSFAVNNTKNESSLPNSSDDQETLEEPKPDRLKLAFEKAKEYKRSSQLEGSQESSKNPVRVTEDVEMAIEKVPGEEKGEKEDTLEAVRIAMEEAREYQKNKGCVGSVSTNVESEVVPEGQDGGKEEVPEAIRIAMEKAKEYKKNQGKVDDNIANEEVTGKEEVPEAVRMAMENAKEYKKNKGNIDDKSSSVESLKLTGGSNSSLGIEDMERNTGKKDELKISSIDFVGLGFAEKKSRGLPAGLVPVSDPLPEGDLPEVEILVGDASKFENTTPTEAKTSTEEEKEDLYKPKVSTWGMFPRPSNISKTYGGGKTIRPGQSLETPEDRAAKEARTRQLLAAYKKKIGLNMDPKLKAECEKALDDGDSLMDVGRLKEALPYYQKVMDKLAFQTELHGRAALQWSICQDSLSRPEKARDMYEKLQSHPNAQVNKKARQFMFSFQAMEMMKVSQSRGSARNTGYQKYFEAFVEDKENYTPGGTEAEEGALNQAIPYIIFLASPILLVLFVAANKGI*

Click here to download the sequence:
Link to NCBI Protein BLAST