Transcript Information: S_Transcript_54888.p1


Annotated TAIR IDAT2G25950.1
Annotated Gene NameProtein of unknown function (DUF1000)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11068735-11070524 | Forward length=204
E-Value1.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9931974048649
Replicate 27.4079439390196
Replicate 39.2886772975799
Condition 2: 8 Hour
Replicate 110.740525050235
Replicate 213.063853220278
Replicate 314.781062207834
Condition 3: 24 Hour
Replicate 112.756136344873
Replicate 27.1134591079047
Replicate 310.862048320451


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54888.p1 GENE.S_Transcript_54888~~S_Transcript_54888.p1 ORF type:complete len:137 (+),score=27.82,PITH|PF06201.9|9.1e-17 S_Transcript_54888:295-705(+)
ATGGCATGCTGTCATGACCACAGTTGCGAGGACTACGATTGTGCAGCTGATTGGTCTCTCTACAAACACATCGACCTCCCTAAGGTATCTGCTCTGAATGAAGCAGTCCCAGGAAGTGCAAAGTCCGTTTTCAGAGCTTGGGAGCAGCGTCTAAACTCATCTGGGCAATTCTTGGAAAGCAATGAAGGTGATCCAGAGCTTATTGTTTTCATCCCATTTACATCTGATGTGAAGCTTAAGAGTATATCAATCATTGGTGGTGGTGATGGAACAAGTCCATGCAAGATGAGAGCGAGCTTCCCAATAGAAAATTCTACAACAGTCGTGCTGGGGATGATTTCCGTCAGTGGTTTGCTTAGGAGTGCACTGAAGCATGGTGATTTGCGGGGCCATTTGCTGCCATCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54888.p1 GENE.S_Transcript_54888~~S_Transcript_54888.p1 ORF type:complete len:137 (+),score=27.82,PITH|PF06201.9|9.1e-17 S_Transcript_54888:295-705(+)
MACCHDHSCEDYDCAADWSLYKHIDLPKVSALNEAVPGSAKSVFRAWEQRLNSSGQFLESNEGDPELIVFIPFTSDVKLKSISIIGGGDGTSPCKMRASFPIENSTTVVLGMISVSGLLRSALKHGDLRGHLLPSL*

Click here to download the sequence:
Link to NCBI Protein BLAST