Transcript Information: S_Transcript_54900.p1


Annotated TAIR IDAT4G16790.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9451747-9453168 | Reverse length=473
E-Value1.1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.9216611868
Replicate 216.438941238933
Replicate 316.217368230376
Condition 2: 8 Hour
Replicate 118.205386002258
Replicate 218.255158543125
Replicate 315.785944455574
Condition 3: 24 Hour
Replicate 115.551711926939
Replicate 212.442876943877
Replicate 313.543058534271


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54900.p1 GENE.S_Transcript_54900~~S_Transcript_54900.p1 ORF type:complete len:663 (+),score=177.63,DUF761|PF05553.7|1.1e-15 S_Transcript_54900:464-2452(+)
ATGGCGGATGGAGGTTCATACACCAAACCTCAACGCTTAGCAACGTCAACAACTGCCCATAACAAAAAAAACCCAACTAAGTTTTACAATCATTTTCTTTTCAAGGCCTTGATAGTCACAATTTTCCTTGTGATCACCCCACTTTTCCCTTCAGAAGCCCCTGATAATGTTAGCTCATCTATTTTCAACAGAGGTTGGGAGCTTCTTCACTTAATTTTTGTGGGTATTGCTGTTTCTTATGGTCTTTTTAGCCGTAGGAATGATGATTCGCAAGGTGAAAACCATGCGAAATTCGATAATGCTCAGTCTTACATGTCTAGATTGCTTCAAGTTTCATCTGTTTTTGATGATGAAGGTGAGAACTCATCTGGGTCTGATGATAATACTAATAGTAGTAATAATAACAACAGTAGCAAGGTCCAAACTTGGAGTTCTCAATACTATAGAAATCAACCTACTACTGTTGTTGCAAAAAATAGTTCATCTGGGGTTGGAGAAAAACCTCTGTTGTTGCCTGTTAGGAGTTTGAAATCTCGGGTTTCGGATGGGAATGATGATGTTGAATTGGTGAATGGGGAGGATCAAGGGGTTGGAGTTACTAGAGTTTATACTAGATCTAAATCAAGTCCTAGTACAAAGGGGTTCTCGAACAATTCTAGAAGAATGAGTAGGAATAATAGTGGACGGATTCATGGTGAGGATTCTGGGGTTTCTAAGGTTTATAATAGATCATATACAAGTCCTACTGTAAAGGATGATTCAAGAAGAATGAGCAGAAATTGGAGCATGGAAACGCGGCTTCCAGTTCCTAATGAATATGGTTATGTTGATCATGAGGATAGTATGGTTTCTGGGTCATTGAGTAGGTCCAACTCGGATGCGAGTCCTAGGGGGTTTTTGAGGAAATCCTCAAGTGGCAATTATGGTGGTTTGGATGATGAAAATACGGAGGAGAAAAAAGTTGAAGAAAATGTTGTGGTGCTTACATCTCCAATACCATGGCGTTCGAGGTCAGGCAGGATAGAAATGAGAGGAGAATCGGATGATTTTTCTGCTCCTTCATCTCCATTCCTCCCTTTGTCATTAGAGGAAATCGAAGCTGCTCGAACGTTGAAGTCTGAATCAACTCGATCATCTAGATCGAATTCATCTTCTTCTTCGCCTACAAAGCTCTCCCCGTCACCAACTATGTCATCAGAGTCCTTGGCTAAGAGCATGGAAGATTTGGGGAAGAGAAAGATTGAAGATTTTGGGAAGAGAAAGATTGAAGATTTTGGGAAGAGAAAGATTGTTTACAGTTCTCGTCTTCCACCTCCTCCTCCTCCTCCACCACCCCGCCCGCCAATTCATAGGTCTCGATTGGTTAAGCCAAGTTCAAGCATGGATAATAAAGAAACATCTAGCAATCGTATGGATTTGCGGCGAAGTGTATGGAGTGAACCAAAAGACATAGGCAGGGAAATTTCTGAGGAATTATGGAGCAAAGAAAATGCAGGGTTAGAAGCAAAAGCAAGAAATGGGACTGATACATCTTTGGTGGGGAAGTCTGTTAGAAGTGTAAGACCTGGTGAGAAAACAAGAGCATCAGGGGAAGTGAGAGAAATTGAGGATGATGAAGGGATGAATGAGGTTGAAGCTCCTGTGACTGAGAAGCCTGAGAGAAAGTCTTCGGGGTACAATCCAATGTCGAATGCGTCATTTGCAGAACTTCCACAGCAAACCAGGGATTTACTTGAGCAGGTTCTGGTGGAAACTACTGACGAATCTGAAAGCGAGGATGACCATTACGTAGAACAAAGAGAGGAAGAGAGGGTCGAGAGTCCAAAGGTCGAGGAAATGCCTTCAAGCAGTGTTCAAACTGACGAAGGACCTGATGTCGATAAGAAGGCTGATGAGTTCATTGCCAAATTCAGAGAGCAAATCAGGCTTCAGAGGATTGAGTCAATCAAGAGATCAACCAACCAACTAAAGAGAAGCTCTATGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54900.p1 GENE.S_Transcript_54900~~S_Transcript_54900.p1 ORF type:complete len:663 (+),score=177.63,DUF761|PF05553.7|1.1e-15 S_Transcript_54900:464-2452(+)
MADGGSYTKPQRLATSTTAHNKKNPTKFYNHFLFKALIVTIFLVITPLFPSEAPDNVSSSIFNRGWELLHLIFVGIAVSYGLFSRRNDDSQGENHAKFDNAQSYMSRLLQVSSVFDDEGENSSGSDDNTNSSNNNNSSKVQTWSSQYYRNQPTTVVAKNSSSGVGEKPLLLPVRSLKSRVSDGNDDVELVNGEDQGVGVTRVYTRSKSSPSTKGFSNNSRRMSRNNSGRIHGEDSGVSKVYNRSYTSPTVKDDSRRMSRNWSMETRLPVPNEYGYVDHEDSMVSGSLSRSNSDASPRGFLRKSSSGNYGGLDDENTEEKKVEENVVVLTSPIPWRSRSGRIEMRGESDDFSAPSSPFLPLSLEEIEAARTLKSESTRSSRSNSSSSSPTKLSPSPTMSSESLAKSMEDLGKRKIEDFGKRKIEDFGKRKIVYSSRLPPPPPPPPPRPPIHRSRLVKPSSSMDNKETSSNRMDLRRSVWSEPKDIGREISEELWSKENAGLEAKARNGTDTSLVGKSVRSVRPGEKTRASGEVREIEDDEGMNEVEAPVTEKPERKSSGYNPMSNASFAELPQQTRDLLEQVLVETTDESESEDDHYVEQREEERVESPKVEEMPSSSVQTDEGPDVDKKADEFIAKFREQIRLQRIESIKRSTNQLKRSSMR*

Click here to download the sequence:
Link to NCBI Protein BLAST