Transcript Information: S_Transcript_54971.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9238314145914
Replicate 20.53163348331361
Replicate 31.1110081978073
Condition 2: 8 Hour
Replicate 12.3123917211349
Replicate 21.3477017252847
Replicate 31.0272697640955
Condition 3: 24 Hour
Replicate 10.78957410206967
Replicate 21.6383478247962
Replicate 30.60776010614738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54971.p1 GENE.S_Transcript_54971~~S_Transcript_54971.p1 ORF type:complete len:83 (-),score=6.25 S_Transcript_54971:47-295(-)
ATGCCTTCATTGTTATATGGAGCTTTGAATTTTTACTCCATCTTCACTTCACTAGCACCAATGCAGATGGTAACCAACACCAAAACAACCACCGCCGAGCCTGCATTAGCTAGATCTGCCAGAGGCATGCGAGAGGGAATTGTAAAAGGTCGCGCAATGTTGCAAATGTTTTTTGCTCTTACCAGGTTTTCTAGGTCCATTGTCAGCTATTTATCAAATAGGTCTAAACGCCGGGCATTGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54971.p1 GENE.S_Transcript_54971~~S_Transcript_54971.p1 ORF type:complete len:83 (-),score=6.25 S_Transcript_54971:47-295(-)
MPSLLYGALNFYSIFTSLAPMQMVTNTKTTTAEPALARSARGMREGIVKGRAMLQMFFALTRFSRSIVSYLSNRSKRRALNK*

Click here to download the sequence:
Link to NCBI Protein BLAST