Transcript Information: S_Transcript_54973.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2811143915869
Replicate 24.2024361061933
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 14.163528585726
Replicate 24.7939675656557
Replicate 34.0601614485679
Condition 3: 24 Hour
Replicate 13.3287441509477
Replicate 22.698072806708
Replicate 35.0444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54973.p1 GENE.S_Transcript_54973~~S_Transcript_54973.p1 ORF type:complete len:210 (+),score=33.60 S_Transcript_54973:123-752(+)
ATGTTCTCAGCTTTAAAATTACCTCTCTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAACCCTAACCCTAACTTCATCTCTTGTAGCACAACTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTGAATTCACGTCTTCAGTTGGATCCCCTTCGCTTAATCTCTCTCCTTCTCAATGGACTCTTTCTCAACGCCATTTCACCGTCATAAATATCGCTGCTTGTGCCTTTGCAATTTCAGCAACTTGGCTCTTTTGTGCTGCAATTCCAACACTTTTGGCTTTTAAAAGAGCAGCAGAGTCAATGGAGAAGCTAATGGACGTTGCAAGAAAAGAGCTTCCGGGCACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACTACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAAGCTCTACTCGTGCAGTTCGTGTCACAGAAGAAAAATTGCATCATTTTGCCAACATGACTTCACGAGATGGTAACCAACACCAAAACAACCACCGCCGAGCCTGCATTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54973.p1 GENE.S_Transcript_54973~~S_Transcript_54973.p1 ORF type:complete len:210 (+),score=33.60 S_Transcript_54973:123-752(+)
MFSALKLPLSIPPSPTFHRKINSNVTGTLTLTSSLVAQLRLPPRRFTVLSTQSSPKVTNSTEPSLLSSEFTSSVGSPSLNLSPSQWTLSQRHFTVINIAACAFAISATWLFCAAIPTLLAFKRAAESMEKLMDVARKELPGTMAAVRLSGMEISDLTTELSDLGQEITQGVRSSTRAVRVTEEKLHHFANMTSRDGNQHQNNHRRACIS*

Click here to download the sequence:
Link to NCBI Protein BLAST