Transcript Information: S_Transcript_54975.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8306592687002
Replicate 21.6714234513269
Replicate 32.6546362544577
Condition 2: 8 Hour
Replicate 12.4233398087651
Replicate 23.2201903345061
Replicate 32.5837391036341
Condition 3: 24 Hour
Replicate 12.3168815823357
Replicate 23.2622153026561
Replicate 32.483989221716


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54975.p1 GENE.S_Transcript_54975~~S_Transcript_54975.p1 ORF type:complete len:132 (+),score=27.61 S_Transcript_54975:2-397(+)
ATGGAGAAGCTAATGGATGTTGCAAGAGAAGAGCTTCCGGACACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACTACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAGGCTCTACTCGTGCAGTTCGTGTCGCAGAAGAAAAATTGCGTCATTTTGCCAACATGACTTCAAGAGCACCAATGCAGGTGGTAGCCAACACCAAAACAACCACCTCTGAGCCTGCATTAGCTAGATCTGCCAGAGGCATGCGAGAGGGAATTGTAAAAGGTCGTGCAATGTTGCAAATGTTTTTTGCTCTTACCAGGTTTTCTATGTCCATTTTCAGCTATTTATCAAATAGGTCTAAACGCCGGGCATTGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54975.p1 GENE.S_Transcript_54975~~S_Transcript_54975.p1 ORF type:complete len:132 (+),score=27.61 S_Transcript_54975:2-397(+)
MEKLMDVAREELPDTMAAVRLSGMEISDLTTELSDLGQEITQGVRGSTRAVRVAEEKLRHFANMTSRAPMQVVANTKTTTSEPALARSARGMREGIVKGRAMLQMFFALTRFSMSIFSYLSNRSKRRALNK*

Click here to download the sequence:
Link to NCBI Protein BLAST