Transcript Information: S_Transcript_54977.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.2679764113514
Replicate 31.0599273611265
Condition 2: 8 Hour
Replicate 11.9609554314605
Replicate 21.0285907420564
Replicate 30.98003897034397
Condition 3: 24 Hour
Replicate 10.75327184450325
Replicate 20.52100716267465
Replicate 31.4495427819032


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54977.p1 GENE.S_Transcript_54977~~S_Transcript_54977.p1 ORF type:complete len:87 (+),score=17.63 S_Transcript_54977:2-262(+)
ATGGAGAAGCTAATGGATGTTGCAAGAGAAGAGCTTCCGGACACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACTACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAGGCTCTACTCGTGCAGTTCGTGTCGCAGAAGAAAAATTGCGTCATTTTGCCAACATGACTTCAAGAGGTAGTTTCCTAGCCTGGATAAACTCAAGTAAATGCCTTAATTGTTATATGGAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54977.p1 GENE.S_Transcript_54977~~S_Transcript_54977.p1 ORF type:complete len:87 (+),score=17.63 S_Transcript_54977:2-262(+)
MEKLMDVAREELPDTMAAVRLSGMEISDLTTELSDLGQEITQGVRGSTRAVRVAEEKLRHFANMTSRGSFLAWINSSKCLNCYMEL*

Click here to download the sequence:
Link to NCBI Protein BLAST