Transcript Information: S_Transcript_54979.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value3.9E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7541624292282
Replicate 23.0666425639789
Replicate 36.1238428694581
Condition 2: 8 Hour
Replicate 12.2231101875004
Replicate 23.3687339650554
Replicate 33.9504273553633
Condition 3: 24 Hour
Replicate 12.9520112825127
Replicate 24.5502633280697
Replicate 33.7005316115614


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54979.p1 GENE.S_Transcript_54979~~S_Transcript_54979.p1 ORF type:complete len:259 (+),score=39.91 S_Transcript_54979:123-899(+)
ATGTTCTCAGCTTTAAAATTACCTCTCTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAACCCTAACCCTAACTTCATCTCTTGTAGCACAACTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTGAATTCACGTCTTCAGTTGGATCCCCTTCGCTTAATCTCTCTCCTTCTCAATGGACTCTTTCTCAACGCCATTTCACCGTCATAAATATCGCTGCTTGTGCCTTTGCAATTTCAGCAACTTGGCTCTTTTGTGCTGCAATTCCAACACTTTTGGCTTTTAAAAGAGCAGCAGAGTCAATGGAGAAGCTAATGGACGTTGCAAGAAAAGAGCTTCCGGGCACAATGGCAGCTGTTCGGTTATCTGGTATGGAAATCAGTGACTTGACTACGGAGCTGAGTGATTTGGGTCAGGAGATAACACAAGGTGTTAGAAGCTCTACTCGTGCAGTTCGTGTCACAGAAGAAAAATTGCATCATTTTGCCAACATGACTTCACGAGCACCAATGCAGATGGTAACCAACACCAAAACAACCACCGCCGAGCCTGCATTAGCTAGATCTGCCAGAGGCATGCGAGAGGGAATTGTAAAAGGTCGTGCAATGTTGCAAATGTTTTTTGCTCTTACCAGGTTTTCTATGTCCATTTTCAGCTATTTATCAAATAGGTCTAAACGCCGGGCATTGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54979.p1 GENE.S_Transcript_54979~~S_Transcript_54979.p1 ORF type:complete len:259 (+),score=39.91 S_Transcript_54979:123-899(+)
MFSALKLPLSIPPSPTFHRKINSNVTGTLTLTSSLVAQLRLPPRRFTVLSTQSSPKVTNSTEPSLLSSEFTSSVGSPSLNLSPSQWTLSQRHFTVINIAACAFAISATWLFCAAIPTLLAFKRAAESMEKLMDVARKELPGTMAAVRLSGMEISDLTTELSDLGQEITQGVRSSTRAVRVTEEKLHHFANMTSRAPMQMVTNTKTTTAEPALARSARGMREGIVKGRAMLQMFFALTRFSMSIFSYLSNRSKRRALNK*

Click here to download the sequence:
Link to NCBI Protein BLAST