Transcript Information: S_Transcript_54980.p1


Annotated TAIR IDAT5G09995.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3125185-3126302 | Reverse length=257
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3800245007072
Replicate 21.0762336369519
Replicate 31.9492322689984
Condition 2: 8 Hour
Replicate 10.52013147114959
Replicate 21.6369645346141
Replicate 32.5994936103636
Condition 3: 24 Hour
Replicate 10.88800339392659
Replicate 22.2111035684241
Replicate 32.665744530622


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54980.p1 GENE.S_Transcript_54980~~S_Transcript_54980.p1 ORF type:complete len:123 (+),score=4.22 S_Transcript_54980:71-439(+)
ATGTTCTCAGCTTTAAAATTACCTCTCTCAATCCCCCCTAGTCCTACATTCCATCGGAAAATCAACTCCAATGTCACCGGAATTCTAACCCTAACTTCATCTCCGGTAGCACAACTCCGTCTCCCACCTCGTCGATTCACCGTTCTTTCAACTCAATCTTCTCCAAAAGTCACCAATTCAACTGAACCCTCCTTATTGTCCTCTGAATTCACGTCTTCAGTTGGATCCCCTTCGCTTAATCTCTCTCCTTCTCAATGGACTCTTTCTCAACGCCATTTCACCGTCATAAATATCGCTGCTTGTGCCGTACTCTCTCTATACCTAAATGGCATTGAATTGATTCCAATTTCGTGTTGCAAATTAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54980.p1 GENE.S_Transcript_54980~~S_Transcript_54980.p1 ORF type:complete len:123 (+),score=4.22 S_Transcript_54980:71-439(+)
MFSALKLPLSIPPSPTFHRKINSNVTGILTLTSSPVAQLRLPPRRFTVLSTQSSPKVTNSTEPSLLSSEFTSSVGSPSLNLSPSQWTLSQRHFTVINIAACAVLSLYLNGIELIPISCCKLI*

Click here to download the sequence:
Link to NCBI Protein BLAST