Transcript Information: S_Transcript_54988.p2


Annotated TAIR IDAT1G50910.1
Annotated Gene Nameunknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18867083-18869839 | Reverse length=500
E-Value1E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.353592446563
Replicate 24.2093480076837
Replicate 33.882681280758
Condition 2: 8 Hour
Replicate 17.8567227484174
Replicate 25.7401453746667
Replicate 35.1887260617389
Condition 3: 24 Hour
Replicate 13.4491921300938
Replicate 24.7713287529152
Replicate 36.1395765986138


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54988.p2 GENE.S_Transcript_54988~~S_Transcript_54988.p2 ORF type:complete len:152 (+),score=18.19,DUF4477|PF14780.2|5.8e-06 S_Transcript_54988:723-1178(+)
ATGGGTCCACATGTTGAAGTTCTGGAAGAAAGGCTTAAGTCTTTCCTTTGTCAGCTCCAAGCAGAATGTGGAATTCTTGACAAGATCATATATAAAAATAAGAATCAGCACCGAAGGTGCTCCTACTTTCAGTACCTTCTAAAGGTGAGGAGGGATTTAAAGCTTCTGCATTCAATTCGTTTGGAGGAGCTTTTAGTTTCATGCTTTGTTGTTTTAACTGGAAGAAAAGCTAAACAAATGGCACATCTTTTAGAAAGTTTGAAGAAGAGTAAATGTGACACTGGAAAATTTAATTTCATGCAACGTCTACTAGGAGCGGCGCGCCTGCTATCAGGGATGGTCGAGCCCGTGCTGAAGGCATCAGTGTATCCTTTGTATTTTGTATTGCTTAATGTCAGCTCACAAGCAGGGTCATCCTTCACATTTTGTCTTCATTTCCTTTCTTGTTTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54988.p2 GENE.S_Transcript_54988~~S_Transcript_54988.p2 ORF type:complete len:152 (+),score=18.19,DUF4477|PF14780.2|5.8e-06 S_Transcript_54988:723-1178(+)
MGPHVEVLEERLKSFLCQLQAECGILDKIIYKNKNQHRRCSYFQYLLKVRRDLKLLHSIRLEELLVSCFVVLTGRKAKQMAHLLESLKKSKCDTGKFNFMQRLLGAARLLSGMVEPVLKASVYPLYFVLLNVSSQAGSSFTFCLHFLSCFF*

Click here to download the sequence:
Link to NCBI Protein BLAST