Transcript Information: S_Transcript_54990.p1


Annotated TAIR IDAT1G50910.1
Annotated Gene Nameunknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18867083-18869839 | Reverse length=500
E-Value4.7E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.755191006874
Replicate 25.4724934933783
Replicate 34.2856488549359
Condition 2: 8 Hour
Replicate 18.6303798933567
Replicate 28.2945235165566
Replicate 38.7934828239871
Condition 3: 24 Hour
Replicate 16.5591686721105
Replicate 26.5683631461477
Replicate 39.8780852761551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_54990.p1 GENE.S_Transcript_54990~~S_Transcript_54990.p1 ORF type:complete len:383 (+),score=62.88,DUF4477|PF14780.2|8.4e-11 S_Transcript_54990:486-1634(+)
ATGGGTCCACATGTTGAAGTTCTGGAAGAAAGGCTTAAGTCTTTCCTTTGTCAGCTCCAAGCAGAATGTGGAATTCTTGACAAGATCATATATAAAAATAAGAATCAGCACCGAAGGTGCTCCTACTTTCAGTACCTTCTAAAGGTGAGGAGGGATTTAAAGCTTCTGCATTCAATTCGTTTGGAGGAGCTTTTAGTTTCATGCTTTGTTGTTTTAACTGGAAGAAAAGCTAAACAAATGGCACATCTTTTAGAAAGTTTGAAGAAGAGTAAATGTGACACTGGAAAATTTAATTTCATGCAACGTCTACTAGGAGCGGCGCGCCTGCTATCAGGGATGGTCGAGCCCGTGCTGAAGGCATCAGTAGAAATATCTACTTTGCTTGCTCGTTCATTTTTCATGGGGTTCTCCCTAATGGTTTTGGCTCTGCTGGGACGCCTCAGAGTTTTGATTCAGCAGATGCTTCTGGATGTTGTTTCAGTGTTCAATGAAGTTTCTTCCATAGCTCAGAAGAAACAGTCCATAAAGATAACACAGGATGGAGTAGAGGTTTTCCGGGAGTATTATCCTGCAATGGAGGAAATTGTCACCTTAGAATGTGCTTGGAAAATAGATAAGTTTGAATTGGTAGAAACACATGTGCGAGGTGAGAATAGACATCAAGATCAGTGTTCGGATGGACAAACTCCTCTGGGAACATCCACCCAATATCGAAGTGTTCAGGCTTTTCTTGGAGAGGATGTATTACATTCTAATGAGGTGGATGCTGACATTGATGATGACGTAAGTGCCTCGGGTGTGAAGAGGAAAAGACTTGAATCGTCCGCTCTCTGTACCGAAACTGATCCTGCTGAGAAGGTTCGAATCTCCTCAGAGCCAGGAGATGTATTAGATGTTGTTACCAACCAAATTAAACATGTTGCTATGGGAGGCAGCTCGGTGGCTAGCTCTAGCATATCCGTAACTTCAAGTGCACGGAAGCCAAATTATGTATCGAGCAAAAAAGTGGCATTCATTTCTGTACGAAAGCCCACCCTATCAGCACCAAATGCAGCTACATTTCAAGTGGATGGCCAGCTTCATGTTGACAAAGTAAATCCCCTTCTAACGCTCTTTAACGGCGAAGATACAAAGGGGAGCTTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_54990.p1 GENE.S_Transcript_54990~~S_Transcript_54990.p1 ORF type:complete len:383 (+),score=62.88,DUF4477|PF14780.2|8.4e-11 S_Transcript_54990:486-1634(+)
MGPHVEVLEERLKSFLCQLQAECGILDKIIYKNKNQHRRCSYFQYLLKVRRDLKLLHSIRLEELLVSCFVVLTGRKAKQMAHLLESLKKSKCDTGKFNFMQRLLGAARLLSGMVEPVLKASVEISTLLARSFFMGFSLMVLALLGRLRVLIQQMLLDVVSVFNEVSSIAQKKQSIKITQDGVEVFREYYPAMEEIVTLECAWKIDKFELVETHVRGENRHQDQCSDGQTPLGTSTQYRSVQAFLGEDVLHSNEVDADIDDDVSASGVKRKRLESSALCTETDPAEKVRISSEPGDVLDVVTNQIKHVAMGGSSVASSSISVTSSARKPNYVSSKKVAFISVRKPTLSAPNAATFQVDGQLHVDKVNPLLTLFNGEDTKGSFL*

Click here to download the sequence:
Link to NCBI Protein BLAST