Transcript Information: S_Transcript_55021.p2


Annotated TAIR IDAT5G03290.1
Annotated Gene Nameisocitrate dehydrogenase V
Annotated Gene Symbol(s)IDH-V
Annotation TypeOrtholog
Chromosome Positionchr5:794043-795939 | Forward length=374
E-Value3.8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.883877913669
Replicate 220.400524590853
Replicate 323.621860600228
Condition 2: 8 Hour
Replicate 124.538805296427
Replicate 226.662340159674
Replicate 321.899843429775
Condition 3: 24 Hour
Replicate 120.647903573301
Replicate 222.974274748626
Replicate 320.903201185062


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55021.p2 GENE.S_Transcript_55021~~S_Transcript_55021.p2 ORF type:complete len:146 (+),score=25.68,Iso_dh|PF00180.16|5.4e-49 S_Transcript_55021:1799-2236(+)
ATGTTGCGCTTATGGGACAAACATCATGCTATGTCTTTGCTAAATATAATTCTCTTGGAACAGCTTGTGAAGAATCCTACCCTCTTTGATGTCTTGGTTATGCCTAACCTTTATGGTGATATTATCAGTGACCTTTGCGCTGGCTTGATTGGGGGCCTGGGTTTAACGCCAAGCTGCAACATTGGAGAGGGAGGTATTGCCCTTGCTGAAGCTGTGCATGGCTCGGCTCCTGATATCGCCGGAAAGAACATGGCGAACCCAACTGCTTTGCTTTTGAGTGCTGTCACAATGCTGCGGCACTTGGAACTACACGACAAAGCTGAAAAAATTCAAAATGCTGTTCTAAACACAATTGCAGAGGGAAAATATAGAACGATCGACCTTGGTGGAAAAGCATCTACAACAGAGTTTACTAATGCAGTTTGTGACCATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55021.p2 GENE.S_Transcript_55021~~S_Transcript_55021.p2 ORF type:complete len:146 (+),score=25.68,Iso_dh|PF00180.16|5.4e-49 S_Transcript_55021:1799-2236(+)
MLRLWDKHHAMSLLNIILLEQLVKNPTLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNMANPTALLLSAVTMLRHLELHDKAEKIQNAVLNTIAEGKYRTIDLGGKASTTEFTNAVCDHF*

Click here to download the sequence:
Link to NCBI Protein BLAST