Transcript Information: S_Transcript_55022.p1


Annotated TAIR IDAT5G03290.1
Annotated Gene Nameisocitrate dehydrogenase V
Annotated Gene Symbol(s)IDH-V
Annotation TypeOrtholog
Chromosome Positionchr5:794043-795939 | Forward length=374
E-Value9.6E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.985976015582
Replicate 266.247837108009
Replicate 361.293513722586
Condition 2: 8 Hour
Replicate 170.758909650649
Replicate 271.336649436109
Replicate 373.255271418736
Condition 3: 24 Hour
Replicate 168.302061587842
Replicate 265.853339297311
Replicate 365.196605349074


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55022.p1 GENE.S_Transcript_55022~~S_Transcript_55022.p1 ORF type:complete len:371 (+),score=61.66,Iso_dh|PF00180.16|6.2e-106 S_Transcript_55022:208-1320(+)
ATGGCTTCACAGATCTTCCGAAGAGTGCTTCGAAGCCACTCTCCTCTTACCACTACTTCCAATTTCCTCTCAAACCCTAATAATCTCCGTGCCTTCTCATCGTCCACCGCCACTCCCATCAGCGCCACTCTCTTTCCCGGCGATGGTATTGGTCCCGAAATCGCCGACTCCGTCAAACAGATCTTTAAAACAGCTGAAGTACCAATTGAGTGGGAGGAGCACTATGTAGGTAAGGAAATAGATCCTAGAACCCAGAGTTTCCTCACATGGGAAAGTCTAGAATCAGTACGCCAGAATAAGGTGGGTCTAAAAGGTCCTATGGCTACACCAATTGGAAAAGGGCATCGTTCACTGAACCTTACTTTAAGAAAAGAACTTAATTTGTATGCCAATGTCAGACCTTGTTTCAGTCTTCCTGGCTATAAGACCAGGTATGATGATGTCAATCTCATCACTATTCGTGAAAACACTGAAGGGGAATACAGTGGACTTGAACATCAAGTGGTTAGGGGCGTGGTAGAAAGCCTCAAGATCATTACTCGTCAAGCAAGTTTGAGGGTTGCTGAGTATGCCTTTCAGTATGCAAAGACCCATGGAAGAGAGAGGGTATCTGCAATACACAAAGCAAACATTATGCAGAAAACTGATGGTCTCTTTTTGAAGTGCTGCAGGGAAGTTGCAGAGAAGTATCCTGAGATAAAATATGAAGAAGTTGTCATTGACAATTGCTGTATGATGCTTGTGAAGAATCCTACCCTCTTTGATGTCTTGGTTATGCCTAACCTTTATGGTGATATTATCAGTGACCTTTGCGCTGGCTTGATTGGGGGCCTGGGTTTAACGCCAAGCTGCAACATTGGAGAGGGAGGTATTGCCCTTGCTGAAGCTGTGCATGGCTCGGCTCCTGATATCGCCGGAAAGAACATGGCGAACCCAACTGCTTTGCTTTTGAGTGCTGTCACAATGCTGCGGCACTTGGAACTACACGACAAAGCTGAAAGAATTCAAAATGCTGTTCTGAAAACAATTGCAGAGGGAAAATATAGAACGATCGACCTTGGTGGAAAAGCATCTACAACAGAGTTTACTAATGCAGTTTGTGACAATCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55022.p1 GENE.S_Transcript_55022~~S_Transcript_55022.p1 ORF type:complete len:371 (+),score=61.66,Iso_dh|PF00180.16|6.2e-106 S_Transcript_55022:208-1320(+)
MASQIFRRVLRSHSPLTTTSNFLSNPNNLRAFSSSTATPISATLFPGDGIGPEIADSVKQIFKTAEVPIEWEEHYVGKEIDPRTQSFLTWESLESVRQNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCFSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFQYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVIDNCCMMLVKNPTLFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNMANPTALLLSAVTMLRHLELHDKAERIQNAVLKTIAEGKYRTIDLGGKASTTEFTNAVCDNL*

Click here to download the sequence:
Link to NCBI Protein BLAST