Transcript Information: S_Transcript_5503.p1


Annotated TAIR IDAT1G59750.1
Annotated Gene Nameauxin response factor 1
Annotated Gene Symbol(s)ARF1
Annotation TypeOrtholog
Chromosome Positionchr1:21980414-21984193 | Forward length=665
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.408441820151
Replicate 247.647650941982
Replicate 344.44032791229
Condition 2: 8 Hour
Replicate 152.863844069278
Replicate 252.695137458633
Replicate 347.735941850312
Condition 3: 24 Hour
Replicate 155.500479591314
Replicate 253.382833291276
Replicate 353.027069261358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5503.p1 GENE.S_Transcript_5503~~S_Transcript_5503.p1 ORF type:complete len:664 (+),score=165.46,Auxin_resp|PF06507.9|3.1e-34,B3|PF02362.17|9.3e-21,B3|PF02362.17|3.4e+03,B3|PF02362.17|62,AUX_IAA|PF02309.12|2.9e-13 S_Transcript_5503:601-2592(+)
ATGGCGCTCGCAAGCACTCAGTGTCCCAGTGGACGCCCTCAGCAAGATGCTCTGTACAAGGAGCTGTGGTATGCATGCGCTGGACCCCTTGTAAATGTTCCCCGTGAAGGCGAGCGTGTTTATTACTTTCCTCAAGGCCACATGGAGCAGCTTGAAGCGTCAACTCATCAGGGATTAGAACAGCAGATGCCTTCATTCAACTTGCCATCTAAAATCCTTTGCAATGTGGTGAATGTTGAACTTCGGGCGGAACCTGAAACGGACGAGGTTTATGCACAGATAACTCTAGTTCCTGAAAGAGATCAAAGTGATGTTACAAAGCCTGATCCTCCTGCCCCTGAGCCTCCAAGATGCAATGTCCATTCATTTTGCAAGACTTTAACAGCTTCTGACACTAGCACACATGGTGGATTTTCTGTGCTTCGGAGACATGCTGATGATTGCTTACCACCCCTGGATATGTCGCAGCAGCCTCCTTGGCAGGAGCTTGTTGCAACAGATCTCCATGGAAACGAATGGCGTTTCCGTCACATTTTTCGAGGTCAACCAAGGCGTCACCTACTGACAACAGGATGGAGTGTTTTTGTCAGTTCAAAGAAGCTAGTGGCTGGTGATGCATTTATATTTTTGAGAGGTGAAAAAGGCGAGCTGCGTGTTGGAGTGAGGAGGCTAATGAGACAATTAAACAATATGCCATCTTCTGTTATTTCTAGTCACAGTATGCACCTTGGTGTTCTTGCCACAGCGGCGCATGCAATTCAAACGGGGACACTTTTTTCAGTTTTCTACAAGCCAAGGACTAGTAGGTCTGAGTTCCTTGTGAGTGTTAACAAGTACCTTGAGGCCAAAAGCCATAAGCTCTCTGTTGGTATGAGGTTTAAAATGAGATTCGAAGGTGACGAAGTTCCTGAAAGAAGGTTCAGTGGCACAATTGTTGGCGTCAGTGATACTTCATCATCCAGTTGGGTGGACTCTGAATGGAGATCTTTGAAGGTTCAATGGGATGAACCTTCATCAGTTATACGTCCAGAGAAGGTTTCACCATGGGAATTGGAGCCGCTTGTGGCAACTAATACTGCCAATTCCCAGCCTGTCCAGAGGAATAAGCGGCCACGACCAGCTGTGATACCTTCCTCAGTGCCAGAGATGTCTCCTCTGGGCATTTGGAAGTGTCCAGGTGAACCTGCTGCCACATGTGCTGAAGTTAAGCGTGCCCATGATCAGTTTTCTTCTGTGACAAAAGCTGGTTCGCTCGGTTTCACTGCCAACAATTCTGTTGCGGCGGTGTCCAGCCAGTCAGTCTATTGGTCAAACAGAATGGAAAATATATCTGAGTACTTGGGTTCCGTTGTTAATAAAGAATCTGTTGAGAAGAGAAAGACTAGTGGAGTTGGGTGTCGGCTGTTTGGAATTCAACTTGTTGACAACTCCAATTTGGATGAGACTGCTGCTGGTGCTACAATATCAGCACAAGGTGGTGAGGAGCTGCCTCTTCCATCGCTAGAAGCTGAATCTGATCGGTCGAATATCAACCGATCTGATGTGCCTTCATTGAGTTGTGATCTCGACAAATCTTCACAGAGATCTCCAACAGAGTCACAGAGCAAGCAAATTCGCTCCTGCACAAAGGTTCATATGCAAGGTGTTGCTGTTGGGAGGGCTGTAGATTTGACGCGTTTTGACTGTTATGAGGACCTCCTCAAGAAACTGGAAGACATGTTTGATATTAAAGGTGAGCTCTGCAGCTCTTCAGGGAAATGGCAGGTTGTCTACACAGATGATGAGGATGACATGATGATGGTTGGAGATGACCCATGGAATGAGTTCTGCAGCATGGTCAGGAAGATCTTCATCTACACATCTGAAGAAGTCAAGCGTCTGTCACCAAAGAATAAAATCTCTGTTGGTGGAGATGCGAAACCAGGCAATGTTGATACTGATATGCCAGCTGCATCTGAGGAGCAGTCATCTGCTGTCAGTCCTAGCTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5503.p1 GENE.S_Transcript_5503~~S_Transcript_5503.p1 ORF type:complete len:664 (+),score=165.46,Auxin_resp|PF06507.9|3.1e-34,B3|PF02362.17|9.3e-21,B3|PF02362.17|3.4e+03,B3|PF02362.17|62,AUX_IAA|PF02309.12|2.9e-13 S_Transcript_5503:601-2592(+)
MALASTQCPSGRPQQDALYKELWYACAGPLVNVPREGERVYYFPQGHMEQLEASTHQGLEQQMPSFNLPSKILCNVVNVELRAEPETDEVYAQITLVPERDQSDVTKPDPPAPEPPRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWRFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEKGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATAAHAIQTGTLFSVFYKPRTSRSEFLVSVNKYLEAKSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVSDTSSSSWVDSEWRSLKVQWDEPSSVIRPEKVSPWELEPLVATNTANSQPVQRNKRPRPAVIPSSVPEMSPLGIWKCPGEPAATCAEVKRAHDQFSSVTKAGSLGFTANNSVAAVSSQSVYWSNRMENISEYLGSVVNKESVEKRKTSGVGCRLFGIQLVDNSNLDETAAGATISAQGGEELPLPSLEAESDRSNINRSDVPSLSCDLDKSSQRSPTESQSKQIRSCTKVHMQGVAVGRAVDLTRFDCYEDLLKKLEDMFDIKGELCSSSGKWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVKRLSPKNKISVGGDAKPGNVDTDMPAASEEQSSAVSPSL*

Click here to download the sequence:
Link to NCBI Protein BLAST