Transcript Information: S_Transcript_55059.p2


Annotated TAIR IDAT3G12320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3924034-3925262 | Forward length=269
E-Value1.8E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1161.42721875987
Replicate 2159.92932899907
Replicate 3180.09808006521
Condition 2: 8 Hour
Replicate 17.308701845778
Replicate 28.6126365655286
Replicate 36.9051337311911
Condition 3: 24 Hour
Replicate 1170.65674238661
Replicate 2157.26344370818
Replicate 3153.34529344895


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55059.p2 GENE.S_Transcript_55059~~S_Transcript_55059.p2 ORF type:complete len:213 (+),score=44.23 S_Transcript_55059:2540-3178(+)
ATGATGAAAATGCAATTCCTTTCAGTTAGCTTCTGTGATTATGAGCTTATATTCCACTGTATTAATTCACATCTCTTTTTTGAGGCATTGGGAATGATGGGCATGTTTCTCACTGATCAAGAGCCTGGGCATGAGGATTCCTCTGCAGAAGAATCCGTGTTGCTGGGACTTGAGGCTGTCCTGAGCCAGATGAGCAACAAAACTCGACTATGCTTTCGAGATTCCTTGTACCGCCTTGCTCAACACTCACAGCCAGAGATATCAACAGAAGTTCTAGTGGAAGACCGTCCATTGGACAAGCAAAACAGTGATGTGAAAACAAGATCAACAAGAACAGTGACAGCAGAATCAGAAACCAATACCATTGACAGAGCCGTGGCTAATCTTATGTTCCATATGGTGGACGGGGAGGTACATGACTATGTTCCTTCCAAGTTGGATGAATACAAGCAGATGGGTGAAGCCTCCGAACCAATGCCGGGTATGCGAGCCTGCAATTATGACTTGGCACCAGCTGACACAGATCTTTCTCAAAAACCTGCAAAATCGTCAGCTGATTCTGAAGTTCCAGTGTTTAGTCACAGAGATCTTCAACCTGCAAATAATGAACCAAAGCAATTTGCCAGGATGTGCTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55059.p2 GENE.S_Transcript_55059~~S_Transcript_55059.p2 ORF type:complete len:213 (+),score=44.23 S_Transcript_55059:2540-3178(+)
MMKMQFLSVSFCDYELIFHCINSHLFFEALGMMGMFLTDQEPGHEDSSAEESVLLGLEAVLSQMSNKTRLCFRDSLYRLAQHSQPEISTEVLVEDRPLDKQNSDVKTRSTRTVTAESETNTIDRAVANLMFHMVDGEVHDYVPSKLDEYKQMGEASEPMPGMRACNYDLAPADTDLSQKPAKSSADSEVPVFSHRDLQPANNEPKQFARMCY*

Click here to download the sequence:
Link to NCBI Protein BLAST