Transcript Information: S_Transcript_5508.p1


Annotated TAIR IDAT2G26590.1
Annotated Gene Nameregulatory particle non-ATPase 13
Annotated Gene Symbol(s)RPN13
Annotation TypeOrtholog
Chromosome Positionchr2:11311182-11314717 | Reverse length=300
E-Value3.9E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4692475372848
Replicate 22.0470629486354
Replicate 33.0421007972949
Condition 2: 8 Hour
Replicate 11.6488703853453
Replicate 22.9982889929531
Replicate 31.7580080498954
Condition 3: 24 Hour
Replicate 12.8150623054889
Replicate 23.3878893593509
Replicate 30.91007376719491


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5508.p1 GENE.S_Transcript_5508~~S_Transcript_5508.p1 ORF type:complete len:194 (+),score=41.91,RPN13_C|PF16550.1|1.1e-14,Proteasom_Rpn13|PF04683.9|1.9e-06 S_Transcript_5508:1101-1682(+)
ATGCAGGTTGGGCAAGCATCTGGAAGGGTCTACATATTAAAGTTCAGCACAGATGACAGGAAGTTTTTTTTCTGGATGCAAGAGCCAAAAGCTGATGATGATGAACAGTTGTGCCGTTCAGTCAACTATTATCTTAATCGACCTTTAGAATTCCTTGCGGAAGAGGATTCTGGAGCTTCTGTTCCTCTTCAAGCTGATGAGATGGCTGAAGATGATATTTCATCTAGAGCGGGTAATCTAATTGGCTCTAGCATGGGTGCTGAAGTAGTGAGTGATGTAACACTTGCGCCTGGTCCCGTAAAGTTGGCAGACTTGCAAAGGATCTTAAGTAATATCGGATCTGCAGGTACTTCTGGTGACATGGAAGATCCGGATGATGGTCTTGGTTTGGGGGATCTTCTAAAGCCTGATTTGGTACTACCATTACTGGAGACATTACCTATAGAAGAACGCCTATCACCATATTTACCGGAGGGTCAACGGACACTGGATGACTTGATAGAAGTATTGCAGAGCCCTCCTTTCCGCCAACAAGTAGATGCTTTCACTTATGTGAGGAATAACTGTTCTTTTCTTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5508.p1 GENE.S_Transcript_5508~~S_Transcript_5508.p1 ORF type:complete len:194 (+),score=41.91,RPN13_C|PF16550.1|1.1e-14,Proteasom_Rpn13|PF04683.9|1.9e-06 S_Transcript_5508:1101-1682(+)
MQVGQASGRVYILKFSTDDRKFFFWMQEPKADDDEQLCRSVNYYLNRPLEFLAEEDSGASVPLQADEMAEDDISSRAGNLIGSSMGAEVVSDVTLAPGPVKLADLQRILSNIGSAGTSGDMEDPDDGLGLGDLLKPDLVLPLLETLPIEERLSPYLPEGQRTLDDLIEVLQSPPFRQQVDAFTYVRNNCSFLI*

Click here to download the sequence:
Link to NCBI Protein BLAST