Transcript Information: S_Transcript_5510.p1


Annotated TAIR IDAT2G26590.1
Annotated Gene Nameregulatory particle non-ATPase 13
Annotated Gene Symbol(s)RPN13
Annotation TypeOrtholog
Chromosome Positionchr2:11311182-11314717 | Reverse length=300
E-Value9.4E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.374230813309
Replicate 238.076104558937
Replicate 339.919599716439
Condition 2: 8 Hour
Replicate 145.88398497267
Replicate 244.888031786806
Replicate 341.737804826528
Condition 3: 24 Hour
Replicate 135.586019879839
Replicate 232.752863181302
Replicate 333.520910628735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5510.p1 GENE.S_Transcript_5510~~S_Transcript_5510.p1 ORF type:complete len:310 (+),score=63.81,Proteasom_Rpn13|PF04683.9|8.7e-25,RPN13_C|PF16550.1|1.5e-22 S_Transcript_5510:337-1266(+)
ATGTCAGGACAGGAAACCATGTTGGAATTTCGTGCTGGAAAAATGTTTCTTGAGGGGAAAAAGGTCACCCCAGATACTCGTAAAGGGCTAGTTCGAATAACACGGGGTGAAGGGGGCTTGGTCCATTTTCAGTGGCTTGATCGGGTGCAGAATGTGGTTGAGGATGACCAGATTGTTTTTCCAGATGAAGCGGTTTTTGAGAAGGTTGGGCAAGCATCTGGAAGGGTCTACATATTAAAGTTCAGCACAGATGACAGGAAGTTTTTTTTCTGGATGCAAGAGCCAAAAGCTGATGATGATGAACAGTTGTGCCGTTCAGTCAACTATTATCTTAATCGACCTTTAGAATTCCTTGCGGAAGAGGATTCTGGAGCTTCTGTTCCTCTTCAAGCTGATGAGATGGCTGAAGATGATATTTCATCTAGAGCGGGTAATCTAATTGGCTCTAGCATGGGTGCTGAAGTAGTGAGTGATGTAACACTTGCGCCTGGTCCCGTAAAGTTGGCAGACTTGCAAAGGATCTTAAGTAATATCGGATCTGCAGGTACTTCTGGTGACATGGAAGATCCGGATGATGGTCTTGGTTTGGGGGATCTTCTAAAGCCTGATTTGGTACTACCATTACTGGAGACATTACCTATAGAAGAACGCCTATCACCATATTTACCGGAGGGTCAACGGACACTGGATGACTTGATAGAAGTATTGCAGAGCCCTCCTTTCCGCCAACAAGTAGATGCTTTCACTTATGTTCTAAAGACAGGCCAAATAGATCTGGCGCAGTTTGGTATTGACCCAGCTAAATATAAACTCAGCGTTCTATCTTTCTTGGAGGCACTTGAAGATTCCGTTGTGGTATCCGATGAAATGAGGCAAGAGACGAGACCTCAGGCGCAAGGCTCTAGTGATCCAATGGACGAAGGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5510.p1 GENE.S_Transcript_5510~~S_Transcript_5510.p1 ORF type:complete len:310 (+),score=63.81,Proteasom_Rpn13|PF04683.9|8.7e-25,RPN13_C|PF16550.1|1.5e-22 S_Transcript_5510:337-1266(+)
MSGQETMLEFRAGKMFLEGKKVTPDTRKGLVRITRGEGGLVHFQWLDRVQNVVEDDQIVFPDEAVFEKVGQASGRVYILKFSTDDRKFFFWMQEPKADDDEQLCRSVNYYLNRPLEFLAEEDSGASVPLQADEMAEDDISSRAGNLIGSSMGAEVVSDVTLAPGPVKLADLQRILSNIGSAGTSGDMEDPDDGLGLGDLLKPDLVLPLLETLPIEERLSPYLPEGQRTLDDLIEVLQSPPFRQQVDAFTYVLKTGQIDLAQFGIDPAKYKLSVLSFLEALEDSVVVSDEMRQETRPQAQGSSDPMDEGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST