Transcript Information: S_Transcript_55121.p1


Annotated TAIR IDAT5G17410.2
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5730651-5736415 | Forward length=679
E-Value5.4E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.928279669803
Replicate 28.722498197157
Replicate 37.6249038071734
Condition 2: 8 Hour
Replicate 110.139203664994
Replicate 211.677295672415
Replicate 312.668333201927
Condition 3: 24 Hour
Replicate 17.6767549217592
Replicate 29.6043025801575
Replicate 311.535663720169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55121.p1 GENE.S_Transcript_55121~~S_Transcript_55121.p1 ORF type:complete len:387 (+),score=58.42,Spc97_Spc98|PF04130.9|1.3e-60,Spc97_Spc98|PF04130.9|5.5e+02 S_Transcript_55121:1456-2616(+)
ATGAGGGAATGTGGTCACAATGTTCAGGTCCGAGTGTCAGAAAATTCTAAATTAAGGAATTTTGGCTCAAACCATCACTATCTTGAGTGTATAAAAGCTGCTTATGACTTTGCCAGTGGTGAACTATTAAATCTCATCAGAGAAAAGTATGATCTGATGGGCAAGCTGCGATCTATAAAGCACTATCTTCTTCTAGATCAGGGGGATTTCCTGGTTCATTTCATGGATATAGCTCGAGAAGAGCTGACCAAAAAGATCGAGGACATCTCCGTGGAGAAGCTTCAGTCTCTCTTGGACCTTGCCTTGCGATCCACAGCAGCTGCAGCAGATCCTTGTCATGAAGACTTGACATGTTGTGTGGAAAGATCTACTTTGCTTAAAAGATTAGGTATGCTCAAAGATCTTGAAATTAGCAAGACTATTTCAGATAATAATGATCTAGATGAACCAGCAAGCATTACTGGTCTGGAGACATTTGCTTTAAGTTACAAGGTACAATGGCCGTTGTCCCTTGTTATATCAAGGAAAGCGCTGACTAAGTATCAGTTAATTTTTCGCTTCTTGTTTCACTGCAAACATGTCAGTCGCCAACTTTGTGCGGCCTGGCAAGTGCATCAAGGTGTTCGTGCTGCTAATTTAAAGGGAACTGCTTTATCCCGTTCTTCTCTTCTCTGTAGAAGTATGCTGAAGTTTATGAATAGCCTCCTACATTACTTAACGTTTGAGGTTCTTGAACCCAATTGGCATGTGATGAATAACAGGCTGCAGTCAGCAAAGAGCATAGATGAGGTTATCCAGTATCATGATTTATTTCTGGAGAAGTGTCTGAGAGAATGTATGCTGCTTCTGCCCGAACTTCTGAAGAAGATGGAGAAATTGAAGCTTATCTGTCTTCAGTATGCTGCGGCTACTCAGTGGTTGATTTCTTCATCCATTGAAATTGTTGACTCGGGTTCAGGCCGACAATCAGTTTTTAGAAATTCATCAAAAGCATTAAAGTTCACCGAAAATGCAGCAGTTGCCGAATCAATTCTGAAATTCGAAAGGGAGTTTAATGCTGAACTCCAGAGCCTCGGACCAATTTTAAGTAACCGGTCCCAAGCAGAACCATATTTAACTCATCTTGCACAATGGATTCTCGGCGTTGGAAATGATAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55121.p1 GENE.S_Transcript_55121~~S_Transcript_55121.p1 ORF type:complete len:387 (+),score=58.42,Spc97_Spc98|PF04130.9|1.3e-60,Spc97_Spc98|PF04130.9|5.5e+02 S_Transcript_55121:1456-2616(+)
MRECGHNVQVRVSENSKLRNFGSNHHYLECIKAAYDFASGELLNLIREKYDLMGKLRSIKHYLLLDQGDFLVHFMDIAREELTKKIEDISVEKLQSLLDLALRSTAAAADPCHEDLTCCVERSTLLKRLGMLKDLEISKTISDNNDLDEPASITGLETFALSYKVQWPLSLVISRKALTKYQLIFRFLFHCKHVSRQLCAAWQVHQGVRAANLKGTALSRSSLLCRSMLKFMNSLLHYLTFEVLEPNWHVMNNRLQSAKSIDEVIQYHDLFLEKCLRECMLLLPELLKKMEKLKLICLQYAAATQWLISSSIEIVDSGSGRQSVFRNSSKALKFTENAAVAESILKFEREFNAELQSLGPILSNRSQAEPYLTHLAQWILGVGNDK*

Click here to download the sequence:
Link to NCBI Protein BLAST