Transcript Information: S_Transcript_55122.p1


Annotated TAIR IDAT5G17410.2
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5730651-5736415 | Forward length=679
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4370647684777
Replicate 26.1680917042514
Replicate 33.9095200914545
Condition 2: 8 Hour
Replicate 18.5825687605051
Replicate 28.3164168522486
Replicate 310.674295421235
Condition 3: 24 Hour
Replicate 17.3487396074349
Replicate 27.1716515894433
Replicate 38.6010658340027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55122.p1 GENE.S_Transcript_55122~~S_Transcript_55122.p1 ORF type:3prime_partial len:651 (+),score=115.38,Spc97_Spc98|PF04130.9|5e-117 S_Transcript_55122:118-2067(+)
ATGGAATCAAATTCATCATCGACGGCCATTGCAGGACCTTCAACTCCTCGTTGGAATGCCGACCGCCCTTTCCTCACAGGCCGTTTCCATCAGGAAACGAAGGCATCCACTCGTAATCACGAGGCCAAGGGTTTCTCTATGGATTCTTTCAGTTCAGGTGCCGAAAAACCTATTGGCTGTTACCATGCATCTGTTCAGGAACTCATTGTTATTGATGACATCCTTTCTGCTATGATTGGAATCGAAGGCCGGTACATTTCAATCAGGAGAATCCGAGGGAAGGAGGACAATTTTATCTTCCAAGTTGATGCATCAATGGATTTAGCTCTTCAGGAGTTGGCCAAACGGATATTCCCGTTATGCGAGAGTTATTTGTTGATCGACCAGTTTGTGGAGTCGAGATCACAGTTCAAGAAGGGACTGGTTAATCATGCCTTTGCAGCTGCTCTAAGAGCACTTCTTCTGGATTACCAGGCTATGGTAGCTCAGCTTGAACATCAATTTCATCTTGGAAGACTTTCACTTCAAGGATTGTGGTTTTACTGTCAGCCAATGATGGGGTCAATGAAAGCATTGTCCTCTGTGATCCAGAAGGCACTATCTAATGATTATGCAGGTGTTGACGTTCTTAATCTCCTTCAGAGCCAGGCTAAAGCCATGGCTGGTGATCATGTTGTTAGATCACTACTTGAAAGGATGGCACAGTGTGCTAGTTCTGCATATCTTGAGATACTAGAAAGGTGGGTGTATGAGGGGGTGATTAATGATCCATATGGTGAGTTCTTTATAGCAGAAAACAGAGCTCTTCAAAAGGAAAGTCTTACTCAGGATTATGATGCACAATATTGGCAAAAAAGATACAGCCTCAAGGCGAGCATTCCTAGCTTCCTTGCAGATGTTGCGGGGACAATTTTGATAACAGGGAAATATTTAAATGTCATGAGGGAATGTGGTCACAATGTTCAGGTCCGAGTGTCAGAAAATTCTAAATTAAGGAATTTTGGCTCAAACCATCACTATCTTGAGTGTATAAAAGCTGCTTATGACTTTGCCAGTGGTGAACTATTAAATCTCATCAGAGAAAAGTATGATCTGATGGGCAAGCTGCGATCTATAAAGCACTATCTTCTTCTAGATCAGGGGGATTTCCTGGTTCATTTCATGGATATAGCTCGAGAAGAGCTGACCAAAAAGATCGAGGACATCTCCGTGGAGAAGCTTCAGTCTCTCTTGGACCTTGCCTTGCGATCCACAGCAGCTGCAGCAGATCCTTGTCATGAAGACTTGACATGTTGTGTGGAAAGATCTACTTTGCTTAAAAGATTAGGTATGCTCAAAGATCTTGAAATTAGCAAGACTATTTCAGATAATAATGATCTAGATGAACCAGCAAGCATTACTGGTCTGGAGACATTTGCTTTAAGTTACAAGGTACAATGGCCGTTGTCCCTTGTTATATCAAGGAAAGCGCTGACTAAGTATCAGTTAATTTTTCGCTTCTTGTTTCACTGCAAACATGTCAGTCGCCAACTTTGTGCGGCCTGGCAAGTGCATCAAGGTGTTCGTGCTGCTAATTTAAAGGGAACTGCTTTATCCCGTTCTTCTCTTCTCTGTAGAAGTATGCTGAAGTTTATGAATAGCCTCCTACATTACTTAACGTTTGAGGTTCTTGAACCCAATTGGCATGTGATGAATAACAGGCTGCAGTCAGCAAAGAGCATAGATGAGGTTATCCAGTATCATGATTTATTTCTGGAGAAGTGTCTGAGAGAATGTATGCTGCTTCTGCCCGAACTTCTGAAGAAGATGGAGAAATTGAAGCTTATCTGTCTTCAGTATGCTGCGGCTACTCAGTGGTTGATTTCTTCATCCATTGAAATTGTTGACTCGGGTTCAGGCCGACAATCAGTTTTTAGAAATTCATCAAAAGCATTAAAGTTCACCGAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55122.p1 GENE.S_Transcript_55122~~S_Transcript_55122.p1 ORF type:3prime_partial len:651 (+),score=115.38,Spc97_Spc98|PF04130.9|5e-117 S_Transcript_55122:118-2067(+)
MESNSSSTAIAGPSTPRWNADRPFLTGRFHQETKASTRNHEAKGFSMDSFSSGAEKPIGCYHASVQELIVIDDILSAMIGIEGRYISIRRIRGKEDNFIFQVDASMDLALQELAKRIFPLCESYLLIDQFVESRSQFKKGLVNHAFAAALRALLLDYQAMVAQLEHQFHLGRLSLQGLWFYCQPMMGSMKALSSVIQKALSNDYAGVDVLNLLQSQAKAMAGDHVVRSLLERMAQCASSAYLEILERWVYEGVINDPYGEFFIAENRALQKESLTQDYDAQYWQKRYSLKASIPSFLADVAGTILITGKYLNVMRECGHNVQVRVSENSKLRNFGSNHHYLECIKAAYDFASGELLNLIREKYDLMGKLRSIKHYLLLDQGDFLVHFMDIAREELTKKIEDISVEKLQSLLDLALRSTAAAADPCHEDLTCCVERSTLLKRLGMLKDLEISKTISDNNDLDEPASITGLETFALSYKVQWPLSLVISRKALTKYQLIFRFLFHCKHVSRQLCAAWQVHQGVRAANLKGTALSRSSLLCRSMLKFMNSLLHYLTFEVLEPNWHVMNNRLQSAKSIDEVIQYHDLFLEKCLRECMLLLPELLKKMEKLKLICLQYAAATQWLISSSIEIVDSGSGRQSVFRNSSKALKFTEN

Click here to download the sequence:
Link to NCBI Protein BLAST