Transcript Information: S_Transcript_55172.p1


Annotated TAIR IDAT2G27290.1
Annotated Gene NameProtein of unknown function (DUF1279)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11678586-11679765 | Reverse length=201
E-Value5.4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.283335620705
Replicate 241.265587876093
Replicate 351.059056379598
Condition 2: 8 Hour
Replicate 155.485506288096
Replicate 248.265191972744
Replicate 348.552763989124
Condition 3: 24 Hour
Replicate 152.184999449753
Replicate 253.092077118666
Replicate 353.480075636774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55172.p1 GENE.S_Transcript_55172~~S_Transcript_55172.p1 ORF type:5prime_partial len:108 (+),score=24.48,DUF1279|PF06916.9|2.3e-23 S_Transcript_55172:1-324(+)
GAAGAGAAAAGTAATAAATCGAAGGGGGATCAAGCAAAGGAGTTGCTGGCAAAATATGGAGGAGCATACTTAGCTACATCAATCACCTTATCTTTGATTTCCTTTACATTATGTTATGGTCTTATTAGTGCTGGTGTTGATGTCCCTGCTCTCCTTCAGAAGGTGGGGATTACGACCAATGAAGCTGGAGAAAAGGTAGGAACATTTGCATTGGCTTATGCTGCTCACAAAGCTGCATCGCCAATAAGGTTTCCGCCCACAGTTGCTCTTACTCCCATTGTTGCTGGTTGGATTGGCAAGAAAGTAGGTAATAAAGATAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55172.p1 GENE.S_Transcript_55172~~S_Transcript_55172.p1 ORF type:5prime_partial len:108 (+),score=24.48,DUF1279|PF06916.9|2.3e-23 S_Transcript_55172:1-324(+)
EEKSNKSKGDQAKELLAKYGGAYLATSITLSLISFTLCYGLISAGVDVPALLQKVGITTNEAGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKVGNKDN*

Click here to download the sequence:
Link to NCBI Protein BLAST