Transcript Information: S_Transcript_55176.p1


Annotated TAIR IDAT2G27290.1
Annotated Gene NameProtein of unknown function (DUF1279)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11678586-11679765 | Reverse length=201
E-Value5.1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7742000823454
Replicate 20.42024361061933
Replicate 31.4051608444648
Condition 2: 8 Hour
Replicate 12.4371874648152
Replicate 21.9175870262623
Replicate 31.8270726518555
Condition 3: 24 Hour
Replicate 11.4563255660396
Replicate 22.8059957189763
Replicate 31.201049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55176.p1 GENE.S_Transcript_55176~~S_Transcript_55176.p1 ORF type:5prime_partial len:105 (+),score=23.45,DUF1279|PF06916.9|2.1e-23 S_Transcript_55176:1-315(+)
AACAAATCGAAAGGAGATCAAGCAAAGGAGTTGCTGGCCAAATATGGAGGAGCATACTTAGCTACATCAATCACCTTATCTTTGATTTCCTTTACATTATGTTATGGTCTTATTAGTGCTGGTGTTGATGTCCCTGCTCTCCTTCAAAAGGTGGGGATTACGACCAATGAGGCTGGAGAAAAGGTAGGAACATTTGCATTGGCTTATGCTGCTCACAAAGCTGCATCGCCAATAAGGTTTCCGCCCACAGTTGCTCTTACTCCCATTGTTGCTGGTTGGATTGGCAAGAAAGTAGCTACTTCATCTTCATTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55176.p1 GENE.S_Transcript_55176~~S_Transcript_55176.p1 ORF type:5prime_partial len:105 (+),score=23.45,DUF1279|PF06916.9|2.1e-23 S_Transcript_55176:1-315(+)
NKSKGDQAKELLAKYGGAYLATSITLSLISFTLCYGLISAGVDVPALLQKVGITTNEAGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKVATSSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST