Transcript Information: S_Transcript_55211.p1


Annotated TAIR IDAT4G03430.1
Annotated Gene Namepre-mRNA splicing factor-related
Annotated Gene Symbol(s)STA1, EMB2770
Annotation TypeOrtholog
Chromosome Positionchr4:1517411-1520500 | Reverse length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.041632914281
Replicate 223.330272112426
Replicate 321.459658831453
Condition 2: 8 Hour
Replicate 124.107865782075
Replicate 223.395682024407
Replicate 323.536680802384
Condition 3: 24 Hour
Replicate 123.418906254279
Replicate 223.038967172061
Replicate 321.439965691983


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55211.p1 GENE.S_Transcript_55211~~S_Transcript_55211.p1 ORF type:complete len:1027 (+),score=336.25,PRP1_N|PF06424.8|1.8e-55,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|5.2,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|0.23,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|5.7e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|0.4,TPR_14|PF13428.2|20,TPR_14|PF13428.2|0.00042,TPR_14|PF13428.2|0.029,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|1.6e+04,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|26,TPR_19|PF14559.2|51,TPR_19|PF14559.2|35,TPR_19|PF14559.2|8e-05,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|0.0071,TPR_19|PF14559.2|88,TPR_16|PF13432.2|19,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|22,TPR_16|PF13432.2|8.4,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.18,TPR_16|PF13432.2|24,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|0.2,TPR_17|PF13431.2|2.5,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|3.1e+03,TPR_17|PF13431.2|2e+03,TPR_2|PF07719.13|7.5e+02,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|6.8e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.32,TPR_2|PF07719.13|6.7e+03,TPR_2|PF07719.13|29,TPR_2|PF07719.13|8.2 S_Transcript_55211:391-3471(+)
ATGGTTTACATCACAACTTTCGACAACAAAACCCTAGCCTTCAATACAAACCCTAATTCCACAACCCTAGGGGCACTCAACCACCAAATCTTTGATCGATTAGGTGTTCCTACTGACAAACAATTCTTATTACTGTCATCTTCTTTAAGAAGAGTAATCGGGGATTCAAATTGCTTAATTGCTGATTTAGGAATTAGGTCAAATTCAACCCTAACCCTGCATGTCCCTTTATATGGTGGTATGCAAGCTCCTGTTCAATCTAAGAACAAGCTAGATTTCCTGAATTCAAAGCCTCCACCTAATTATGTTGCTGGGCTGGGCCGTGGGGCCACCGGGTTTACTACCCGGTCTGATATTGGTCCTGCTAGGGCGGCCCCGGACTTGCCTGACCGGTCTACCACCACCATTGGCGGGGCTGCTGGTGCTGCTGCTCCAGGAGGGGCTGTAGGGCGGGGCCGAGGGAAGGAGGAGGAGGAAGAAGAGGAAGGGGATGAAAAGGGTTATGACGAGAATCAGAAGTTTGACGAGTTTGAAGGGAATGATGTAGGGCTGTTTGCTTCGGCCGAGTATGATGAGGATGATAAGGAGGCTGATGCTGTTTGGGAGGCTATTGATAAGAGGATGGATTCTAGGAGGAAAGATAGGAGGGAGGCTAGATTGAAGGAAGAGATTGAGAAGTATAGGGCTTCGAATCCTAAGATTACGGAACAATTTGCTGATTTGAAGAGAAAGTTGCAAACTATGTCTGCTGAGGAATGGGATAGTATTCCTGAGATTGGGGATTATTCCTTGAGGAATAAGAAGAGGAGGTTTGAGAGTTTTGTGCCCGTTCCCGATACTTTGCTTGAGAAAGCTAGGCAGGAGAAAGAGCATGTTATGGCTCTTGACCCTAAGAGTAGAGCTGCTGGTGGGACTGAGACTCCTTGGGCACAAACTCCTGTTACTGACTTGACAGCTGTTGGGGAGGGCAGGGGTACTGTTATGAAACTCAAACTTGATCGGTTATCTGATTCCGTGTCTGGCCAGACAGTTGTTGATCCTAAGGGTTATTTGACTGATCTTAAGAGTATGAAGATTACTAGTGATGCTGAGATTTCTGATATCAAGAAGGCTAGGTTGTTGCTCAAGTCTGTTATACAAACCAATCCCAAGCACCCTCCTGGTTGGATTGCGGCTGCAAGGTTGGAGGAGGTTGCTGGCAAGATTCAGGTGGCCAGGCAATTGATCAACAAAGGCTGTGATGAGTGTCCTAAGAATGAGGATGTGTGGTTGGAGGCTTGTCGATTGGCAAGCCCTGATGAAGCCAAGGCTGTGCTAGCCAAGGGTGTGAAAGCCATCCCCAATTCTGTCAAGTTGTGGCTGCAGGCTGCAAAGCTGGAGCATGATGATGGCAACAAGAGTAGGGTGTTGAGGAAGGGGCTTGAACATATACCCGACTCAGTGAGGCTTTGGAAGGCAGTTGTGGAGCTTGCTAATGAGGAGGATGCCAGGCTTTTGCTTCAGAGGGCAGTGGAGTGCTGTCCCTTGCACATCGAGCTGTGGCTTGCTCTTGCCAGGCTTGAAACTTATGACATGGCAAAGAAAGTACTTAACAGGGCCAGGGAAAGGCTTCCCAAGGAGCCAGCTATTTGGATCACTGCTGCGAAGCTGGAAGAAGCTAATTCCAATACTGCAATGGTTGAGAAGATCATCGAGAGGGGTATCAGGGCCTTACAGAGAGAAGGGGTTGTTATTGACAGAGAAGCTTGGATGAAAGAAGCAGAGGCTGCTGAGCGTGCTGGGTCTGTTGTCACTTGCCAGGCCATTATCAAGCACACTGTCGGTATTGGGGTTGAGGAGGAGGATAGGAAGAGAACATGGGTTGCTGATGCTGAAGAGTGCAAGAAGAGAGGGTCTATTGAAACTGCTAGAGCTATTTATGCTCATGCTCTTTCTGTCTTCTTGACCAAGAAGAGTATTTGGCTTAAAGCTGCACAACTTGAGAAGAGTCATGGAACTAGAGAGTCTCTTGACGCCTTGTTGCGGAGGGCAGTGACATATGTGCCACAGGCTGAAGTTCTGTGGCTTATGGGTGCAAAAGAAAAGTGGCTTGCTGGTGATGTGCCTGCTGCCCGAGCCATTCTCCAAGAGGCTTATGCTGCGATCCCTAACTCTGAGGAGATCTGGCTGGCTGCTTTCAAGCTGGAATTCGAGAATCATGAACCTGAGAGAGCGAAAATGCTCCTTGCTAAGGCCCGAGAAAGAGGAGGCACTGAAAGAGTTTGGATGAAATCAGCCATTGTAGAGAGAGAGCTCGGTAACACTGCCGAGGAGAGGAAGCTGCTTGATGAAGGTCTGCAACGCTTCCCATCATTCTTCAAGTTGTGGTTGATGCTTGGGCAGCTCGAGGAGCGCCATGGGCACCAGGCGAAGGCAAAGGAAGCATATGATTCTGGTCTTCGGAACTGTCCCCACTGCATTCCTCTCTGGCTTTCACTTTCTAACCTGGAGGAGAAGTTGGTGGGCCTGAGCAAAGCTCGAGCGGTGCTCACCATGGCTAGGAAGAAGAATCCTCAGAACCCTGAACTGTGGCTCGCTGCTGTCAGAGCTGAGTTAAGGCATGGCAATAAGAGGGAGGCAGATATCTTGATGGCAAAGGCACTTCAGGAATGCCCTAACAGTGGTATCTTATGGGCAGCTCAAATTGAGATGGTTCCCCGTCCGCAACGGAAATCCAAGAGTACAGATGCTCTTAAGAAATGCGACCAAGATCCCCACGTCATTGGTGCCGTGTCCAAATTGTTTTGGCATGACAGGAAAGTTGACAAGGCAAGAAACTGGCTCAACAGGGCTGTGACACTTGCTCCTGATATTGGGGACTTCTGGGCCTTGTACTACAAATTTGAACTTCAGCATGGAACTGAGGAGAATCAGAAGGATGTGCTAAATCATTGTGTCGCTGCAGAGCCGAAGCATGGTGAGAAATGGCAGGCAATTTCAAAGGCAGTTGAGAATGCTCACCAGCCAACTGAAGCAATTTTGAAGAAAGTTGTGATAGCCCTCGGGAAGGAAGAAACTGCGGCAGAAAACAACAAAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55211.p1 GENE.S_Transcript_55211~~S_Transcript_55211.p1 ORF type:complete len:1027 (+),score=336.25,PRP1_N|PF06424.8|1.8e-55,TPR_14|PF13428.2|11,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|5.2,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|0.23,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.4e+03,TPR_14|PF13428.2|5.7e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|0.4,TPR_14|PF13428.2|20,TPR_14|PF13428.2|0.00042,TPR_14|PF13428.2|0.029,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|1.6e+04,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|26,TPR_19|PF14559.2|51,TPR_19|PF14559.2|35,TPR_19|PF14559.2|8e-05,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|0.0071,TPR_19|PF14559.2|88,TPR_16|PF13432.2|19,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|1.3e+03,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|5.8e+03,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|22,TPR_16|PF13432.2|8.4,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.18,TPR_16|PF13432.2|24,TPR_17|PF13431.2|1.3e+03,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|0.2,TPR_17|PF13431.2|2.5,TPR_17|PF13431.2|1.1e+03,TPR_17|PF13431.2|3.1e+03,TPR_17|PF13431.2|2e+03,TPR_2|PF07719.13|7.5e+02,TPR_2|PF07719.13|5.2e+02,TPR_2|PF07719.13|6.8e+02,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.32,TPR_2|PF07719.13|6.7e+03,TPR_2|PF07719.13|29,TPR_2|PF07719.13|8.2 S_Transcript_55211:391-3471(+)
MVYITTFDNKTLAFNTNPNSTTLGALNHQIFDRLGVPTDKQFLLLSSSLRRVIGDSNCLIADLGIRSNSTLTLHVPLYGGMQAPVQSKNKLDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSTTTIGGAAGAAAPGGAVGRGRGKEEEEEEEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLQTMSAEEWDSIPEIGDYSLRNKKRRFESFVPVPDTLLEKARQEKEHVMALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVMKLKLDRLSDSVSGQTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIQVARQLINKGCDECPKNEDVWLEACRLASPDEAKAVLAKGVKAIPNSVKLWLQAAKLEHDDGNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLQRAVECCPLHIELWLALARLETYDMAKKVLNRARERLPKEPAIWITAAKLEEANSNTAMVEKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVVTCQAIIKHTVGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGTRESLDALLRRAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAKMLLAKARERGGTERVWMKSAIVERELGNTAEERKLLDEGLQRFPSFFKLWLMLGQLEERHGHQAKAKEAYDSGLRNCPHCIPLWLSLSNLEEKLVGLSKARAVLTMARKKNPQNPELWLAAVRAELRHGNKREADILMAKALQECPNSGILWAAQIEMVPRPQRKSKSTDALKKCDQDPHVIGAVSKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEENQKDVLNHCVAAEPKHGEKWQAISKAVENAHQPTEAILKKVVIALGKEETAAENNKN*

Click here to download the sequence:
Link to NCBI Protein BLAST