Transcript Information: S_Transcript_55231.p1


Annotated TAIR IDAT1G60390.1
Annotated Gene Namepolygalacturonase 1
Annotated Gene Symbol(s)PG1
Annotation TypeOrtholog
Chromosome Positionchr1:22247611-22249556 | Reverse length=624
E-Value7.5E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.765618304579
Replicate 223.624156203124
Replicate 324.770013232282
Condition 2: 8 Hour
Replicate 122.309639101001
Replicate 223.060213213257
Replicate 319.741754243383
Condition 3: 24 Hour
Replicate 115.728316113228
Replicate 218.898132114431
Replicate 317.927053100252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55231.p1 GENE.S_Transcript_55231~~S_Transcript_55231.p1 ORF type:5prime_partial len:650 (+),score=14.77,BURP|PF03181.11|2.4e-61 S_Transcript_55231:3-1952(+)
AACATTCTCACTCCCCCCCCCTCCCTTCTCCCCCACAAACAAAAACTTAAAATGAATAAACCAGAACTGCAGCTTATCAGCTCCTCTTTCCTTTTCTTTTTCTTCGTCCTGCTCTTATCCTCCAATGTTAATATTGCGGTAGGAAGGGGGACATCAGGGGAGAACCCGTTTACGCCGAAAGCATACGCGATCCGGTACTGGAACAACCGGATCTACAAGGTGCCCCGGCCCGAGTTCCTCTTGAAGAAGACCTCCCCCTTGACGGCTTCCGACTCGGCCCGTTTCGCCCAGTTGGTGTCCCAGAACTCGCTCTCGGCCCATCTCGACTCCTTCTGCAAGTCGGCCCAGCTCTTCTGCTTCCCTGACCCGGCCCAGAGTCTCGAGAAGCACACCACCGACTCCAGCTTCGCCACCTACTCCGACAAGAACTTCACCAACTACGGGTCGGGCCGGGCCGGGGGAAAGGACACCTTCAAGGAGTACTCCAAGGACAACAACCTCCCCGTCAACTCGTTCCGGAGGTACAGCCGTGACTCGGCGGGTCACAAGGACGAGTTCACTAATTACGCCAACGACGGCAACGTCGTGTCGCAGGACTTCCACACCTACGGCGCCAGCGCCACCGGAGGCGGCGGAGCTTTCACCACCTACGCCGCCAACGTCAACGCCCCGGGGTTGAAGTTCACATCCTACTCCGACGAAGGCAATGGCCGAAAACAGACCTTCACCTCCTACTCCCCGGAGGCCAATGCCGGCGACCAGGGTTTCGCTAACTACGGTAAGAACGGCAACGGGTTGACAAACAACTTCAAGGAGTACGGCAAGGACACCAATGTCGTGGGGTCCACCTTCGCCGGCTACTCCAAGACCGGCAATGGAGGATCCGACACCTTCACGTCGTATGGTTTCAACGGCAATGTCCCCCAGGACAAGTTCAAGGGGTACGGCGAAGGTGGCAATGCCGGTGTCGAGAGCTTCTCCAGCTACAGAGACCAATCCAATGTCGGAGACGATAGCTTCCAGTCCTACGGCAAGGGGTCCAACAACGAGAAGGTGAAGTTCGATAACTATGGTGAGAGCTTCAACCAGGGTTCCGATAACTTCACCGCCTATGGTCAGGATGCGGAGGGCCAGAAGATTGAGTTCAAAGGGTACGGCCGAGGGACCGATTTCAAGAAGTATTCCAAAGACGGCGTCACCTTCAAGGACTACAAGAATGGCAGCGTGAGTGAGAGCGGAGTTACGACAATGGAGGTTGAGGGTAAAGTGGTAAAAAACAAGTGGATTGAGCCGGGGAAGTTTTTCAGAGAAAGAATGTTGAAGGAAGGGACAGTGATGCCAATGCCGGATATTCAAGATAAGATGCCACCGAGGTCGTTCTTACCAAGATCAATTGTGTCCAAAATACCCTTCGCTTCTTCACAAATTTCCCAACTCAAGGACATGTTTCACGCCTTTGATAATTCCTCTATGGAGAGCATCCTAAACGCTGCGTTGCACGAGTGCGAGCGGGTCCCCAGCCAGGGCGAGACCAAGAAGTGTGTGGGGTCCCTCGAGGATATGATCGACTTTGCCGTCTCGGTCTTGGGCCGGGCCTCTGAGCCCCGCTCCACTTTGAATGTTAACGGGTCCAAGAAAAACATCTTGATTGGTAAGGTTAGAGGGATCAATGGTGGCAATGTCACTCACTCCGTCTCGTGTCACCAGAGCTTGTATCCGTATTTGCTTTACTATTGCCATTCGGTCCCTAAGGTTCGGGTGTATGAAGCTGATATATTGGATCCGGATACCAAAGCCAAGATCAATCATGGTGTTGCTATCTGTCACTTGGACACGTCCGTGTGGAGTCCGACCCATGGGGCGTTCCTTGCGCTCGGACTGGGTCCCGGTAAGATTGAGGTTTGTCATTGGATATTTGAGAATGATTTAACTTGGACAATTGCTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55231.p1 GENE.S_Transcript_55231~~S_Transcript_55231.p1 ORF type:5prime_partial len:650 (+),score=14.77,BURP|PF03181.11|2.4e-61 S_Transcript_55231:3-1952(+)
NILTPPPSLLPHKQKLKMNKPELQLISSSFLFFFFVLLLSSNVNIAVGRGTSGENPFTPKAYAIRYWNNRIYKVPRPEFLLKKTSPLTASDSARFAQLVSQNSLSAHLDSFCKSAQLFCFPDPAQSLEKHTTDSSFATYSDKNFTNYGSGRAGGKDTFKEYSKDNNLPVNSFRRYSRDSAGHKDEFTNYANDGNVVSQDFHTYGASATGGGGAFTTYAANVNAPGLKFTSYSDEGNGRKQTFTSYSPEANAGDQGFANYGKNGNGLTNNFKEYGKDTNVVGSTFAGYSKTGNGGSDTFTSYGFNGNVPQDKFKGYGEGGNAGVESFSSYRDQSNVGDDSFQSYGKGSNNEKVKFDNYGESFNQGSDNFTAYGQDAEGQKIEFKGYGRGTDFKKYSKDGVTFKDYKNGSVSESGVTTMEVEGKVVKNKWIEPGKFFRERMLKEGTVMPMPDIQDKMPPRSFLPRSIVSKIPFASSQISQLKDMFHAFDNSSMESILNAALHECERVPSQGETKKCVGSLEDMIDFAVSVLGRASEPRSTLNVNGSKKNILIGKVRGINGGNVTHSVSCHQSLYPYLLYYCHSVPKVRVYEADILDPDTKAKINHGVAICHLDTSVWSPTHGAFLALGLGPGKIEVCHWIFENDLTWTIAD*

Click here to download the sequence:
Link to NCBI Protein BLAST