Transcript Information: S_Transcript_55274.p1


Annotated TAIR IDAT3G01510.1
Annotated Gene Namelike SEX4 1
Annotated Gene Symbol(s)LSF1
Annotation TypeOrtholog
Chromosome Positionchr3:198855-201682 | Reverse length=591
E-Value1E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0877796479021
Replicate 28.1473699999973
Replicate 36.2681194532499
Condition 2: 8 Hour
Replicate 112.195893155223
Replicate 210.418262846931
Replicate 311.598328843887
Condition 3: 24 Hour
Replicate 17.638570370894
Replicate 26.5547298186495
Replicate 39.2315979521993


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55274.p1 GENE.S_Transcript_55274~~S_Transcript_55274.p1 ORF type:5prime_partial len:612 (+),score=110.18,AMPK1_CBM|PF16561.1|9.2e-20,DSPc|PF00782.16|6.8e-11 S_Transcript_55274:2-1837(+)
ACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCTCACTCGTTTGTTTCATCAATTCGAGCAGCAAAATATCAAAAATTCCAGTTCCATTTCAATGTCTTTGTATAGCCGTTCAATTTCGTCCTCAATATGGGGGATCGAATTTAGGTCATTTAATGGCGGCATAATTGAACCAAATCTGTTGAGACGCTCAAGTTATTGTAACGTTAGAATCAATCGGTCAATTTCAAGGGTTTTTGCCATGTCAGATGGAAATCAAACGGCATACAAGATGAATTTGAACGAGTATATGGTCACTCTGGAGAAGCCACTTGGTATTCGCTTTGCTCTTTCTTTGGATGGCAAGGTTTTTGTTCATGCTCTCCGCAAAGGAGGGAATGCTGAAAAGTCGAGGATAGTAATGGTGGGTGACACTTTGAGGAAGGCAAGTGATTCATCTGGTGGTCAATTTATTGAGATCAAGGACATTGGTGATGCACAGAATATGCTCAAGGAGAAAGCTGGATCTTTTAGCCTGGTTCTTGAGAGACCTTTCTCACCGTTCCCCATACATGAGCTTTTTCTGACAGATGACATTGATATTCTTTTTAATCGAGGCCGTGTTCCCATTGCTAGTTGGAGCAAGTCCCTAATGTCTTCTGGTTTGCAAGCCTCATGTGAAAGTAATGGGAATTCTGGATTTGTCATGTTCTCTTCCAAGTTCCTTTCATCCAAGGCATGGGTGGTGCTTACTGGTCAGAATGGAAATGGTAATCCATTTCTACAGAAAAGCACATTTCCACCACCAACTACCCAACTTGTTTGCATTTCTTCTGAAGAAGATTCGATTGATGCTGATTGGGGTCATGGAAGCTTCCCACTAGATGAATATGCCAAGGCTCTTGATCGTTCAAAAGGAGAACTCTACTACAACCACTCTCTTGGTATGGGCTACAGTAAGATAACTGAACACATATATGTGGGTTCCTGCATACAAAACGAAGCTGATGTGGAGGCTCTGGCAAAAGTTGGAGTCACTGCTGTGCTGAATTTCCAGAGTGCAATTGAAGCAGAAAATTGGGGAATCAATTCGAACTCTATCAATGAGTTTTGCCAACGATTTAATATTCTAATGATCAGTTACCCAATAAGGGAAGGGGATTCCTTTGATATGAGGAAGAAACTACCTTTCTGTGTAGGGCTTCTGTTACGTTTGTTGAGAAAAAACCATCGTGTATTTGTTACTTGTACGACGGGCTTTGACCGGTCTCCTGCTTGTGTCATTGCATATCTGCACTGGATGACAGACACTTCACTGAATGCAGCTTATAATTTTGTCACTGGATTACATCCTTGTAAGCCGGACAGGCCGGCGATAGCTTGGGCAACATGGGATCTTATTGCCATGGTGGAGAATGGAAGACATGATGGCCCTGCGACCCATTCTGTTACGTTTGTCTGGAATGGCCAAGAGGGTGAAGATGTATGTTTGGTTGGAGACTTTACTGGGAACTGGAAAGAGCCCATAAAGGCTTCCCACAAAGGAGGACCAAGATATGAAGTTGATGTGAGGCTACCACAAGGGAAGTACTATTACAAGTACATTGTGAATGGGCAGTGGAGGCACTCTATGGCCTCACCAACAGAAAGCGATGAAAGAGGGAATGTCAACAACATAATCATTATTGGTGACACAGCCAGTGTGAGGCCCTATATTCTACAACAGAAAAAGGATGCCAATATTATAAAGGTTATAGAAAGGCAGCTGACAGAGAATGAACGCTTCATGCTAGCAAAAGCAGCACGTTGTATTGCTTTCTCTATCTGTCCTATCAGATTAGCTCCAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55274.p1 GENE.S_Transcript_55274~~S_Transcript_55274.p1 ORF type:5prime_partial len:612 (+),score=110.18,AMPK1_CBM|PF16561.1|9.2e-20,DSPc|PF00782.16|6.8e-11 S_Transcript_55274:2-1837(+)
TLTLTLTLTLTLTLTRLFHQFEQQNIKNSSSISMSLYSRSISSSIWGIEFRSFNGGIIEPNLLRRSSYCNVRINRSISRVFAMSDGNQTAYKMNLNEYMVTLEKPLGIRFALSLDGKVFVHALRKGGNAEKSRIVMVGDTLRKASDSSGGQFIEIKDIGDAQNMLKEKAGSFSLVLERPFSPFPIHELFLTDDIDILFNRGRVPIASWSKSLMSSGLQASCESNGNSGFVMFSSKFLSSKAWVVLTGQNGNGNPFLQKSTFPPPTTQLVCISSEEDSIDADWGHGSFPLDEYAKALDRSKGELYYNHSLGMGYSKITEHIYVGSCIQNEADVEALAKVGVTAVLNFQSAIEAENWGINSNSINEFCQRFNILMISYPIREGDSFDMRKKLPFCVGLLLRLLRKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLNAAYNFVTGLHPCKPDRPAIAWATWDLIAMVENGRHDGPATHSVTFVWNGQEGEDVCLVGDFTGNWKEPIKASHKGGPRYEVDVRLPQGKYYYKYIVNGQWRHSMASPTESDERGNVNNIIIIGDTASVRPYILQQKKDANIIKVIERQLTENERFMLAKAARCIAFSICPIRLAPK*

Click here to download the sequence:
Link to NCBI Protein BLAST