Transcript Information: S_Transcript_55277.p2


Annotated TAIR IDAT3G01510.1
Annotated Gene Namelike SEX4 1
Annotated Gene Symbol(s)LSF1
Annotation TypeOrtholog
Chromosome Positionchr3:198855-201682 | Reverse length=591
E-Value1.1E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2257130339645
Replicate 20.96897386570166
Replicate 32.8037943370339
Condition 2: 8 Hour
Replicate 11.6570404638313
Replicate 25.06389817183
Replicate 33.3846109372774
Condition 3: 24 Hour
Replicate 10
Replicate 21.2250708960188
Replicate 31.1077249231977


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55277.p2 GENE.S_Transcript_55277~~S_Transcript_55277.p2 ORF type:complete len:296 (+),score=40.71,AMPK1_CBM|PF16561.1|2.8e-20,DSPc|PF00782.16|5.5e-10 S_Transcript_55277:963-1850(+)
ATGTGGGTTCCTGCATACAAAACGAAGCTGATGTGGAGGCTCTGGCAAAAGTTTTGTTTGTATCAGGGAGTCACTGCTGTGCTGAATTTCCAGAGTGCAATTGAAGCAGAAAATTGGGGAATCAATTCGAACTCTATCAATGAGTTTTGCCAACGATTTAATATTCTAATGATCAGTTACCCAATAAGGGAAGGGGATTCCTTTGATATGAGGAAGAAACTACCTTTCTGTGTAGGGCTTCTGTTACGTTTGTTGAGAAAAAACCATCGTGTATTTGTTACTTGTACGACGGGCTTTGACCGGTCTCCTGCTTGTGTCATTGCATATCTGCACTGGATGACAGACACTTCACTGAATGCAGCTTATAATTTTGTCACTGGATTACATCCTTGTAAGCCGGACAGGCCGGCGATAGCTTGGGCAACATGGGATCTTATTGCCATGGTGGAGAATGGAAGACATGATGGCCCTGCGACCCATTCTGTTACGTTTGTCTGGAATGGCCAAGAGGGTGAAGATGTATGTTTGGTTGGAGACTTTACTGGGAACTGGAAAGAGCCCATAAAGGCTTCCCACAAAGGAGGACCAAGATATGAAGTTGATGTGAGGCTACCACAAGGGAAGTACTATTACAAGTACATTGTGAATGGGCAGTGGAGGCACTCTATGGCCTCACCAACAGAAAGCGATGAAAGAGGGAATGTCAACAACATAATCATTATTGGTGACACAGCCAGTGTGAGGCCCTATATTCTACAACAGAAAAAGGATGCCAATATTATAAAGGTTATAGAAAGGCAGCTGACAGAGAATGAACGCTTCATGCTAGCAAAAGCAGCACGTTGTATTGCTTTCTCTATCTGTCCTATCAGATTAGCTCCAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55277.p2 GENE.S_Transcript_55277~~S_Transcript_55277.p2 ORF type:complete len:296 (+),score=40.71,AMPK1_CBM|PF16561.1|2.8e-20,DSPc|PF00782.16|5.5e-10 S_Transcript_55277:963-1850(+)
MWVPAYKTKLMWRLWQKFCLYQGVTAVLNFQSAIEAENWGINSNSINEFCQRFNILMISYPIREGDSFDMRKKLPFCVGLLLRLLRKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLNAAYNFVTGLHPCKPDRPAIAWATWDLIAMVENGRHDGPATHSVTFVWNGQEGEDVCLVGDFTGNWKEPIKASHKGGPRYEVDVRLPQGKYYYKYIVNGQWRHSMASPTESDERGNVNNIIIIGDTASVRPYILQQKKDANIIKVIERQLTENERFMLAKAARCIAFSICPIRLAPK*

Click here to download the sequence:
Link to NCBI Protein BLAST