Transcript Information: S_Transcript_55299.p1


Annotated TAIR IDAT2G33450.1
Annotated Gene NameRibosomal L28 family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14173620-14174380 | Forward length=143
E-Value5.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1223.79741453211
Replicate 2210.4538630849
Replicate 3241.2845005756
Condition 2: 8 Hour
Replicate 1243.52932776664
Replicate 2279.01056826851
Replicate 3291.35339887016
Condition 3: 24 Hour
Replicate 1165.93056578866
Replicate 2224.64182147955
Replicate 3200.60019772981


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55299.p1 GENE.S_Transcript_55299~~S_Transcript_55299.p1 ORF type:5prime_partial len:193 (+),score=35.59,Ribosomal_L28|PF00830.15|3.6e+03,Ribosomal_L28|PF00830.15|1.3e+04,Ribosomal_L28|PF00830.15|3.4e-19 S_Transcript_55299:1-579(+)
AAAAGAAAAAGAAAAAAAGACCCAAATTTTGGGCCACAAGGAAGATACGTCATCCACCAAAACAAACCAGATAAAGAAGATATACAAAGCACAAAGAGAGAAACAAAGAGAGGGAGTGAAAGAATGGCAACTTCAACAATGTTGATGAGCAATCCAAGCTGTGTATGTTTACGCAAACCCCAATTCTCAAGCAGCTCTCCGTCACTAACTCTGAAAACAAAGCAAGTTTCTGAACTTGGTTTTGTCACTTCTCAATTGAGTGGTCTCAAGATTTCCACTTCCCAACTTATCACTATCACTACCCCCATTTCAGCTCCCTTTAAGCCTTCTCTTCAGCCTGTTGCTCGTAGAATATGCCCCTTCACTGGGAAGAAATCAAACAGGGCAAACAAGGTCTCCTTCTCAAATCACAAAACAAAGAAATTGCAGTTTGTCAACCTTCAATACAAGAAAATTTGGTGGGAAGCTGGTAAAAGGTATGTGAAACTTAGGTTATCGACTAAGGCCATCAAGACTATAGAGAAGAATGGACTGGATGCCGTTGCAAAGAAGGCGGGGATTGATCTCAGCAAGGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55299.p1 GENE.S_Transcript_55299~~S_Transcript_55299.p1 ORF type:5prime_partial len:193 (+),score=35.59,Ribosomal_L28|PF00830.15|3.6e+03,Ribosomal_L28|PF00830.15|1.3e+04,Ribosomal_L28|PF00830.15|3.4e-19 S_Transcript_55299:1-579(+)
KRKRKKDPNFGPQGRYVIHQNKPDKEDIQSTKRETKRGSERMATSTMLMSNPSCVCLRKPQFSSSSPSLTLKTKQVSELGFVTSQLSGLKISTSQLITITTPISAPFKPSLQPVARRICPFTGKKSNRANKVSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKA*

Click here to download the sequence:
Link to NCBI Protein BLAST