Transcript Information: S_Transcript_55302.p1


Annotated TAIR IDAT5G41620.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16646330-16648776 | Forward length=623
E-Value2E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.39536562956
Replicate 211.934636498897
Replicate 310.521023940309
Condition 2: 8 Hour
Replicate 112.108241750533
Replicate 212.131848121409
Replicate 312.388942299271
Condition 3: 24 Hour
Replicate 110.585238845778
Replicate 210.312794797828
Replicate 310.833629811594


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55302.p1 GENE.S_Transcript_55302~~S_Transcript_55302.p1 ORF type:complete len:745 (+),score=169.98 S_Transcript_55302:318-2552(+)
ATGAAAGATACAGCCTCTTTGAGTCATCACAGTCAAAAACTTGGGGGACAGACAGGCAGGCAAAGGCAAGGCATCAAAATGAAAAAACAAATGGAAGATGTAGATGTAGAAGTGGAAGAGAGACAGAGAGAAAGTCCTCCTAATATGGAAGAAGAGAGAGAAAAAGGGAAAGAAAAAAAAGAAGAGGAGGAATTTCTGGGATTAAAGTTGTTAAAACGAGGAAATATTTTGGTGGGGAAAAGCAAAGGGGGTGTTTGTACTCCACCACCAACCTGGACTTTTGAGCCCCATTTTCAGCAACCGCAACAAGACCCACTTCCTTCCCATACTCATACTAATAATAATAGTATTAAGTCTAACGTTAACCTTAGTAATAGTACTACTATTGGGAGCTCCTCAGTTACAGCAAGGCAGTTGGGTGCTAATCTTTGGGAGGTTTTGCCTCACCTTAATTCCCTTGCTAAGATGAGCAATTCTCATAGAAAACCATCAGGGTTTAGTAGGTTGCCTTCTACTGCCCACAAAAATAAGGGTTTGGAGATGCATACCCTTTTGGAGGACCCACCTGATACTGCTTCTGATGATCAGGCAGTAAGTACTGGAAGCTTCCACAGGCAGATTGCAGCATCGCTGATGCGACATCATCGATCTGTTGACAGGAATGGTCGCGCTCTACAGCCAGTGTCTCCGGCTAGCTATTGCAGTTCTATGGAGGTAACGCCATATAATCCTGCTGCTACTCCAAGCAGCTCCATAGATTACAAGGGGAGGCTAGGTGATCCAAGTTATAGCCTTAAAACATCCACAGAGTTGCTCAAAGTTCTAAACCGCATCTGGTGCCTTGAAGAGCAGCATGCATCAAACGTATCACTAGTGAAGGCTCTCAGAACAGAGCTGGACAATTCCAGGTCGAGAATCAAAGATCTGCTTCGAGAGAAACAAATGGATAGACAGCTCATTGACGACCTGATGAAGCAAGTTGCAGAACATAAACTTGTCAAAAAGAATATGGAGCAAGAACGAGTACAGTCGGCACTGCAATCATTGAAGGAGGAACTAGAAGCTGAGAGGAAACTGAGGAAGCGCTCTGAGAGTATGCACCGCAAGCTGGCTCAAGAGGTTTCTCAGATAAAATCTTCCTTTTCTAAGGCTTTGGATGAACTAGAAACAGAAAGAAGAGCACGGGTTCTCTTGGAAGAGTTGTGTGATGAGTTTGCTATGGGAATAAGAGACTATGAGCAGGAACTTAGGTCCCTGAAATACAGGACCGAAAAGGAACAGGTTACCAGAGACCATGTTGATAGCTTGGTTCTCCATATATCTGAGGCTTGGTTAGATGAACGGGTTCAGATGAAGGTAGCAGAAGAGATGCAAGAAGATGTGAGAGGAAAGAGCACTGTTATGGACAAGCTAAGGCCTGAGATAGAAACTTTTCTAAAAGCTAGGCAAGCCTTGGATTCTAGGGAAAACACCGACTTCCTCACCCAAAATTCCAAGGGTAGTGGCTTGCGTCGTCGGTCTTTGGAGTCCTTCCCCTTGAATGAGGGTACAAGTGCTCCTCAAAATGACGATAATGAGGATGATGATGAATCTATTGATAGTGACTCCCATTGTTTTGAACTGAACCGAAACATGGGAGGAGAATATTCCAATGCGATTCATACGAAAAATGCTGACAACTCAGCAGAAAGAGGTCTAGAAGAGACGGTGAAGACGGATACTTCAAAGAGAAAGGGTGAATCCCAAGAGGTAAGCACTGGTCGTAATTTATCTAGCTTGCAGGCTCGATTTGAGAAGCACATGGCTAGGATGATTTCAAGCAATGGGAATTCTCAAGAAGCAGGGACTCCTGTTGAAACTAATACATCCAATATATCTGGCAACCAAGAAAGTTGTATCCAAGAAAGGAGGAGCAAACGGTTTGGTAATCGGGGAGGGAGTGCAATTCTTATGCTTGACAATTTGTTGAGGACCAACTCGTCATCAATAGAGGGAGAGAGGATTCATCCCATTAATGATTTACCTGATGATTCCCATGGTCAATTCTTAGTAACAGGACGTGCTAGTCCGGTGAAAAAGTGGGACTCGAAAATCACTTCACAAGATCCTGAGATGTTGGAGTCATCTTCAAGATGGCCTAGAGGGTCAAAGGAGAGCTCATTGAAGGCTAAACTTCTAGAGGCAAGGTTGGAGGGGCGGAGCACTCGATCAAAGGGCTGCAGAGGTACTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55302.p1 GENE.S_Transcript_55302~~S_Transcript_55302.p1 ORF type:complete len:745 (+),score=169.98 S_Transcript_55302:318-2552(+)
MKDTASLSHHSQKLGGQTGRQRQGIKMKKQMEDVDVEVEERQRESPPNMEEEREKGKEKKEEEEFLGLKLLKRGNILVGKSKGGVCTPPPTWTFEPHFQQPQQDPLPSHTHTNNNSIKSNVNLSNSTTIGSSSVTARQLGANLWEVLPHLNSLAKMSNSHRKPSGFSRLPSTAHKNKGLEMHTLLEDPPDTASDDQAVSTGSFHRQIAASLMRHHRSVDRNGRALQPVSPASYCSSMEVTPYNPAATPSSSIDYKGRLGDPSYSLKTSTELLKVLNRIWCLEEQHASNVSLVKALRTELDNSRSRIKDLLREKQMDRQLIDDLMKQVAEHKLVKKNMEQERVQSALQSLKEELEAERKLRKRSESMHRKLAQEVSQIKSSFSKALDELETERRARVLLEELCDEFAMGIRDYEQELRSLKYRTEKEQVTRDHVDSLVLHISEAWLDERVQMKVAEEMQEDVRGKSTVMDKLRPEIETFLKARQALDSRENTDFLTQNSKGSGLRRRSLESFPLNEGTSAPQNDDNEDDDESIDSDSHCFELNRNMGGEYSNAIHTKNADNSAERGLEETVKTDTSKRKGESQEVSTGRNLSSLQARFEKHMARMISSNGNSQEAGTPVETNTSNISGNQESCIQERRSKRFGNRGGSAILMLDNLLRTNSSSIEGERIHPINDLPDDSHGQFLVTGRASPVKKWDSKITSQDPEMLESSSRWPRGSKESSLKAKLLEARLEGRSTRSKGCRGTT*

Click here to download the sequence:
Link to NCBI Protein BLAST