Transcript Information: S_Transcript_55335.p1


Annotated TAIR IDAT5G01010.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1388-4924 | Reverse length=479
E-Value6.5E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.896033413556
Replicate 224.29957006565
Replicate 324.434500571591
Condition 2: 8 Hour
Replicate 125.993390501759
Replicate 227.990584818828
Replicate 326.816711503041
Condition 3: 24 Hour
Replicate 126.676931451647
Replicate 224.491538316375
Replicate 321.967587062521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55335.p1 GENE.S_Transcript_55335~~S_Transcript_55335.p1 ORF type:complete len:434 (+),score=66.15 S_Transcript_55335:389-1690(+)
ATGGCTTCAACCGATGGTCTTGTGCCCATAACCAGGGTTTATCTGGCTACTTACTATGACAAATACCCCTTTACTCCTCTCTCTGACCTTGTTTCTTCCCTTTCTTCCGATATTCGTTCCTTCATCACCGACTTGCTCTCTCTTTCCCCCCTTTCCCCAGGTGAAAAGCTCGTTGTAGATGAAGTCGATCGTCAACCTCCTCATAAACTCGATGAGAATATGTGGAAGAATAGGGAGCACATTGAAGAGATCATCTTTTTACTCGACAAGTCTCATTGGCCCACCTTGCTTCAACAACAATCCACATCAGAAGACACGGAAATTGCCTCAGTCCTTGAGCAGCTCAAGGACAAACTAGAAAAGGCCTTGAAAACATTGGAATATTTTCAATCAAGAAATGCTGATTTTGTATTTAACACAGTCATGACCTATATGCCTCAAGATTTTCGGGGTACTCTAATTAGACAACAGAGAGAGCGCTCAGAGAGGAATAAACAAGCTGAAGTTGATGCTTTGGTCAAGTCTGGTGGCAGCATACGTGATCGATATGCTTTGTTATGGAATCAACAGATGGAAAGGAGGAGACAGTTGGCTCAGCTTGGCTCAGCAACAGGAGTGTATAAAACACTGGTGAAGTACCTAGTAGGAGTACCACAGGTTCTGCTGGACTTTATCAAACAGATAAATGATGACGATGGGCCTATGGAAGAGCAGAGACATCGATATGGACCACCTTTGTACAACCTTACCAAGATGGTGCTTACTATCCGGTTGTTTCTTTTTCTATCATGGGCACGCTTTGATACCAGAAAATTAACTAGACAACAATTAGATGTGTTGGAACAAGCAGTCAACATATATACTACGGAGTTTGAGAGGTTTATTAAGTTTCTTGGGGATGTCTTTGCAAATGCTCCCTTCTTTATTTCGGAAGATGAAGTTGACAACGTAGAATCAAGGAGAAACGATGACTACAAAGAGATAAGCATCCCCGCTGGGAAAACCCATGAGGTGGTGTTATCTGTTGATTCCGTAAATTCATATATCGCCTGGGACTTTTCTTTGGACCAAAGTAAATTGAAATTGGATATTGGATTCAGCGTGGAATACATTAACTCCTCTGGTGAAAAAGTTCTTATCTTGCCTTATAGGCGTTGTGAATCTGACCAAGGCAATTTTTGTACGTGCATGGCGGGAGATTACAAGCTAATATGGGACAACACATATTCAACCTTTTTCAGAAAGGCTATGCTTTACAAGGTGGATTGTATACCCCCTGTTATAGAACCAGCACAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55335.p1 GENE.S_Transcript_55335~~S_Transcript_55335.p1 ORF type:complete len:434 (+),score=66.15 S_Transcript_55335:389-1690(+)
MASTDGLVPITRVYLATYYDKYPFTPLSDLVSSLSSDIRSFITDLLSLSPLSPGEKLVVDEVDRQPPHKLDENMWKNREHIEEIIFLLDKSHWPTLLQQQSTSEDTEIASVLEQLKDKLEKALKTLEYFQSRNADFVFNTVMTYMPQDFRGTLIRQQRERSERNKQAEVDALVKSGGSIRDRYALLWNQQMERRRQLAQLGSATGVYKTLVKYLVGVPQVLLDFIKQINDDDGPMEEQRHRYGPPLYNLTKMVLTIRLFLFLSWARFDTRKLTRQQLDVLEQAVNIYTTEFERFIKFLGDVFANAPFFISEDEVDNVESRRNDDYKEISIPAGKTHEVVLSVDSVNSYIAWDFSLDQSKLKLDIGFSVEYINSSGEKVLILPYRRCESDQGNFCTCMAGDYKLIWDNTYSTFFRKAMLYKVDCIPPVIEPAQE*

Click here to download the sequence:
Link to NCBI Protein BLAST